Variant report

Variant	rs564194356
Chromosome Location	chr14:64435100-64435101
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915909	chr14:63620440-64560369	Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv1038825	chr14:64109441-64491720	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
3	nsv1037140	chr14:64248421-64442980	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv542119	chr14:64248421-64442980	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	esv1793389	chr14:64346190-64457224	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
6	nsv902019	chr14:64395569-64882380	Enhancers Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
7	nsv456326	chr14:64420413-64754361	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
8	nsv564905	chr14:64420413-64754361	Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
9	nsv902020	chr14:64434288-64506541	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:88 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64395000-64491000	Weak transcription	Psoas Muscle	Psoas
2	chr14:64414400-64439600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr14:64415400-64435800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr14:64415600-64439000	Weak transcription	Stomach Smooth Muscle	stomach
5	chr14:64416800-64458600	Weak transcription	Gastric	stomach
6	chr14:64417000-64459200	Weak transcription	NHEK	skin
7	chr14:64417000-64466000	Weak transcription	Colon Smooth Muscle	Colon
8	chr14:64417200-64458600	Weak transcription	Esophagus	oesophagus
9	chr14:64417400-64466200	Weak transcription	Right Ventricle	heart
10	chr14:64417600-64459200	Weak transcription	Pancreas	Pancrea
11	chr14:64418000-64463000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr14:64418200-64450800	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr14:64418400-64458600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr14:64419000-64463000	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr14:64419200-64438800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr14:64419200-64489000	Weak transcription	Small Intestine	intestine
17	chr14:64419400-64448200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
18	chr14:64419400-64459000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr14:64419400-64459200	Weak transcription	HMEC	breast
20	chr14:64420000-64458000	Weak transcription	Colonic Mucosa	Colon
21	chr14:64420200-64442400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr14:64420200-64459000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr14:64420600-64462600	Weak transcription	HUVEC	blood vessel
24	chr14:64421600-64466000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr14:64423400-64444400	Weak transcription	Liver	Liver
26	chr14:64423800-64444400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr14:64423800-64463000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr14:64426800-64440000	Strong transcription	Placenta	Placenta
29	chr14:64427400-64435400	Strong transcription	Primary T cells fromperipheralblood	blood
30	chr14:64427400-64435800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
31	chr14:64427800-64436000	Strong transcription	Primary neutrophils fromperipheralblood	blood
32	chr14:64427800-64436000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
33	chr14:64428400-64442200	Weak transcription	Primary B cells from cord blood	blood
34	chr14:64428400-64459400	Weak transcription	Aorta	Aorta
35	chr14:64429600-64458000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
36	chr14:64430400-64438400	Weak transcription	Pancreatic Islets	Pancreatic Islet
37	chr14:64430400-64439000	Weak transcription	Rectal Smooth Muscle	rectum
38	chr14:64431000-64443200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
39	chr14:64431000-64444600	Weak transcription	Fetal Lung	lung
40	chr14:64431000-64458200	Weak transcription	Rectal Mucosa Donor 31	rectum
41	chr14:64431200-64463800	Weak transcription	H1 Cell Line	embryonic stem cell
42	chr14:64431200-64464800	Weak transcription	Stomach Mucosa	stomach
43	chr14:64431600-64435400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr14:64431600-64436000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
45	chr14:64431600-64436200	Strong transcription	Primary T helper cells PMA-I stimulated	--
46	chr14:64431800-64435800	Strong transcription	Dnd41	blood
47	chr14:64431800-64439400	Strong transcription	Primary T helper cells fromperipheralblood	blood
48	chr14:64431800-64439400	Weak transcription	Fetal Brain Female	brain
49	chr14:64432000-64435400	Strong transcription	HUES6 Cell Line	embryonic stem cell
50	chr14:64432000-64435800	Strong transcription	Primary T killer memory cells from peripheral blood	blood

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