Variant report

Variant rs564278854
Chromosome Location chr5:177666169-177666170
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:177660200-177667000 Enhancers Primary hematopoietic stem cells short term culture blood
2 chr5:177660200-177667000 Weak transcription Muscle Satellite Cultured Cells --
3 chr5:177660200-177667600 Enhancers Fetal Muscle Trunk muscle
4 chr5:177660400-177666200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr5:177660400-177668000 Enhancers Primary hematopoietic stem cells blood
6 chr5:177661200-177666400 Enhancers Rectal Mucosa Donor 29 rectum
7 chr5:177661400-177666200 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr5:177661400-177667800 Enhancers Adipose Nuclei Adipose
9 chr5:177661400-177669600 Enhancers Primary monocytes fromperipheralblood blood
10 chr5:177661600-177666400 Enhancers Fetal Muscle Leg muscle
11 chr5:177661600-177671600 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr5:177661800-177666400 Enhancers Duodenum Mucosa Duodenum
13 chr5:177661800-177666600 Enhancers Rectal Mucosa Donor 31 rectum
14 chr5:177661800-177667600 Enhancers Liver Liver
15 chr5:177661800-177669800 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr5:177662200-177674800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr5:177662600-177667600 Weak transcription Dnd41 blood
18 chr5:177662600-177669600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr5:177663200-177667600 Enhancers Left Ventricle heart
20 chr5:177663400-177666800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr5:177663400-177666800 Enhancers Right Atrium heart
22 chr5:177663400-177667800 Enhancers Primary T helper naive cells from peripheral blood blood
23 chr5:177663400-177668400 Enhancers Primary T helper cells fromperipheralblood blood
24 chr5:177663400-177669200 Enhancers Colonic Mucosa Colon
25 chr5:177663600-177666400 Enhancers Brain Hippocampus Middle brain
26 chr5:177663600-177666600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr5:177663600-177667200 Enhancers Sigmoid Colon Sigmoid Colon
28 chr5:177663600-177667200 Enhancers HMEC breast
29 chr5:177663600-177668400 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr5:177663600-177669000 Enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr5:177663800-177666600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr5:177663800-177666600 Enhancers NHEK skin
33 chr5:177663800-177667000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr5:177663800-177667600 Enhancers Fetal Thymus thymus
35 chr5:177663800-177667800 Enhancers Primary T helper cells PMA-I stimulated --
36 chr5:177664000-177666600 Enhancers Psoas Muscle Psoas
37 chr5:177664000-177667600 Enhancers Right Ventricle heart
38 chr5:177664000-177667800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
39 chr5:177664000-177668600 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr5:177664000-177669800 Enhancers Placenta Placenta
41 chr5:177664200-177666400 Enhancers Esophagus oesophagus
42 chr5:177664200-177667600 Enhancers Primary B cells from peripheral blood blood
43 chr5:177664200-177668400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr5:177664200-177669600 Weak transcription Brain Cingulate Gyrus brain
45 chr5:177664200-177669800 Enhancers Lung lung
46 chr5:177664400-177666200 Enhancers Skeletal Muscle Male skeletal muscle
47 chr5:177664400-177666800 Enhancers Skeletal Muscle Female skeletal muscle
48 chr5:177664400-177668400 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr5:177664600-177666200 Weak transcription Brain Substantia Nigra brain
50 chr5:177664600-177666600 Enhancers Primary mononuclear cells fromperipheralblood Blood

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