Variant report

Variant rs564314813
Chromosome Location chr1:10698974-10698975
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10651600-10715800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:10685200-10699400 Weak transcription Aorta Aorta
3 chr1:10691600-10703000 Weak transcription Primary B cells from peripheral blood blood
4 chr1:10691600-10706000 Weak transcription Dnd41 blood
5 chr1:10692400-10699400 Weak transcription Duodenum Mucosa Duodenum
6 chr1:10693200-10699400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr1:10694400-10699400 Weak transcription Liver Liver
8 chr1:10695800-10700400 Strong transcription Fetal Intestine Small intestine
9 chr1:10696000-10699400 Weak transcription Pancreas Pancrea
10 chr1:10696000-10699600 Weak transcription Fetal Heart heart
11 chr1:10696200-10704000 Weak transcription HSMMtube muscle
12 chr1:10696400-10699600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:10696600-10699400 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:10697400-10700800 Strong transcription Gastric stomach
15 chr1:10697400-10722000 Strong transcription Sigmoid Colon Sigmoid Colon
16 chr1:10697800-10700600 Weak transcription Stomach Mucosa stomach
17 chr1:10697800-10703400 Weak transcription HMEC breast
18 chr1:10698200-10699000 Flanking Active TSS Primary hematopoietic stem cells blood
19 chr1:10698200-10699000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:10698200-10699000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:10698200-10699000 Genic enhancers Esophagus oesophagus
22 chr1:10698200-10699000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
23 chr1:10698200-10699000 Active TSS Psoas Muscle Psoas
24 chr1:10698200-10699400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
25 chr1:10698200-10699600 Bivalent/Poised TSS Fetal Brain Female brain
26 chr1:10698200-10699800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
27 chr1:10698200-10713600 Weak transcription Small Intestine intestine
28 chr1:10698400-10699000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:10698400-10699200 Active TSS ES-WA7 Cell Line embryonic stem cell
30 chr1:10698400-10699200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:10698400-10699200 Active TSS Right Atrium heart
32 chr1:10698400-10699200 Active TSS NHLF lung
33 chr1:10698400-10699400 Active TSS H9 Cell Line embryonic stem cell
34 chr1:10698400-10699400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr1:10698400-10699400 Active TSS Ovary ovary
36 chr1:10698400-10699400 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr1:10698400-10699400 Weak transcription Rectal Smooth Muscle rectum
38 chr1:10698400-10699400 Transcr. at gene 5' and 3' Right Ventricle heart
39 chr1:10698400-10699600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
40 chr1:10698400-10699600 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
41 chr1:10698400-10699800 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:10698400-10699800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
43 chr1:10698400-10700000 Bivalent Enhancer Placenta Placenta
44 chr1:10698400-10700200 Strong transcription Colon Smooth Muscle Colon
45 chr1:10698400-10703200 Weak transcription NHEK skin
46 chr1:10698600-10699000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
47 chr1:10698600-10699000 Active TSS Primary T helper naive cells fromperipheralblood blood
48 chr1:10698600-10699000 Active TSS Primary T helper 17 cells PMA-I stimulated --
49 chr1:10698600-10699000 Active TSS Primary T regulatory cells fromperipheralblood blood
50 chr1:10698600-10699000 Bivalent/Poised TSS Fetal Muscle Leg muscle

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