Variant report

Variant	rs564511612
Chromosome Location	chr17:45310607-45310608
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:45308918..45311294-chr17:45317434..45318977,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1062983	chr17:45030095-45789543	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
2	nsv521092	chr17:45309693-45317499	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:45304200-45316600	Weak transcription	Left Ventricle	heart
2	chr17:45307800-45310800	Enhancers	K562	blood
3	chr17:45307800-45314000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr17:45307800-45316400	Weak transcription	Fetal Heart	heart
5	chr17:45307800-45317200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr17:45308000-45316800	Weak transcription	HSMMtube	muscle
7	chr17:45308200-45312600	Weak transcription	Fetal Muscle Leg	muscle
8	chr17:45308200-45314000	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr17:45308200-45317000	Weak transcription	Fetal Muscle Trunk	muscle
10	chr17:45308400-45313200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr17:45308600-45314000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr17:45308600-45314000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr17:45309000-45316600	Weak transcription	Hela-S3	cervix
14	chr17:45309400-45310800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr17:45309600-45314000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr17:45309800-45310800	Enhancers	Ovary	ovary
17	chr17:45310400-45310800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr17:45310400-45310800	Enhancers	HUVEC	blood vessel
19	chr17:45310600-45310800	Enhancers	Lung	lung
20	chr17:45310600-45310800	Enhancers	Rectal Mucosa Donor 29	rectum
21	chr17:45310600-45314600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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