Variant report

Variant rs564547722
Chromosome Location chr21:48022236-48022237
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48018000-48024600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr21:48018000-48025000 Weak transcription Spleen Spleen
3 chr21:48018600-48022600 Genic enhancers Cortex derived primary cultured neurospheres brain
4 chr21:48018600-48022800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr21:48018600-48023200 Enhancers K562 blood
6 chr21:48018800-48024600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr21:48019200-48024400 Weak transcription Right Atrium heart
8 chr21:48019400-48022600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
9 chr21:48019400-48022600 Weak transcription Fetal Stomach stomach
10 chr21:48019400-48023800 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr21:48019400-48024400 Weak transcription Fetal Thymus thymus
12 chr21:48019400-48024800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr21:48019400-48024800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr21:48019600-48022400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr21:48019600-48024600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr21:48019800-48022600 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr21:48019800-48022600 Weak transcription HSMMtube muscle
18 chr21:48019800-48024600 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr21:48019800-48024800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr21:48019800-48025000 Weak transcription Fetal Brain Male brain
21 chr21:48019800-48025800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr21:48020000-48023800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr21:48020000-48024400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr21:48020000-48024800 Weak transcription Osteobl bone
25 chr21:48020200-48023400 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr21:48020400-48024000 Weak transcription Primary T cells from cord blood blood
27 chr21:48020600-48024400 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr21:48020800-48022600 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
29 chr21:48020800-48022800 Transcr. at gene 5' and 3' Brain Cingulate Gyrus brain
30 chr21:48020800-48022800 Enhancers Stomach Mucosa stomach
31 chr21:48021000-48022600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr21:48021000-48022600 Transcr. at gene 5' and 3' Brain Inferior Temporal Lobe brain
33 chr21:48021000-48022800 Enhancers Ovary ovary
34 chr21:48021200-48022800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
35 chr21:48021200-48024400 Weak transcription Adipose Nuclei Adipose
36 chr21:48021200-48024600 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr21:48021400-48022400 Enhancers Pancreas Pancrea
38 chr21:48021400-48022600 Flanking Active TSS Brain Substantia Nigra brain
39 chr21:48021400-48022800 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr21:48021400-48022800 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
41 chr21:48021400-48024600 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr21:48021600-48022600 Bivalent Enhancer HepG2 liver
43 chr21:48021600-48022800 Enhancers Fetal Lung lung
44 chr21:48021600-48023200 Active TSS Duodenum Smooth Muscle Duodenum
45 chr21:48021800-48022400 Transcr. at gene 5' and 3' Brain Anterior Caudate brain
46 chr21:48021800-48024800 Weak transcription Primary T cells fromperipheralblood blood
47 chr21:48022000-48022800 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr21:48022000-48022800 Flanking Active TSS Brain Angular Gyrus brain
49 chr21:48022000-48026200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr21:48022200-48022600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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