Variant report
| Variant | rs564554474 |
|---|---|
| Chromosome Location | chr3:178919351-178919352 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:178897800-178919400 | Weak transcription | Fetal Intestine Small | intestine |
| 2 | chr3:178899200-178951800 | Weak transcription | K562 | blood |
| 3 | chr3:178900000-178929800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr3:178906400-178962400 | Weak transcription | HepG2 | liver |
| 5 | chr3:178908000-178919800 | Weak transcription | Brain Angular Gyrus | brain |
| 6 | chr3:178908000-178923600 | Weak transcription | Fetal Brain Female | brain |
| 7 | chr3:178908800-178920000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 8 | chr3:178908800-178922800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 9 | chr3:178909000-178919800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 10 | chr3:178909000-178931400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 11 | chr3:178909000-178947000 | Weak transcription | Ovary | ovary |
| 12 | chr3:178909400-178925400 | Weak transcription | Aorta | Aorta |
| 13 | chr3:178910000-178919400 | Weak transcription | Fetal Stomach | stomach |
| 14 | chr3:178911000-178919600 | Weak transcription | Placenta | Placenta |
| 15 | chr3:178911200-178953400 | Weak transcription | Gastric | stomach |
| 16 | chr3:178911400-178919400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 17 | chr3:178912400-178919600 | Weak transcription | Spleen | Spleen |
| 18 | chr3:178912400-178924000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 19 | chr3:178912400-178978600 | Weak transcription | Right Ventricle | heart |
| 20 | chr3:178912600-178919600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 21 | chr3:178912600-178947800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 22 | chr3:178913000-178919600 | Weak transcription | Fetal Intestine Large | intestine |
| 23 | chr3:178913000-178925000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 24 | chr3:178913000-178925400 | Weak transcription | Pancreas | Pancrea |
| 25 | chr3:178913000-178930800 | Weak transcription | Left Ventricle | heart |
| 26 | chr3:178913000-178948200 | Weak transcription | Psoas Muscle | Psoas |
| 27 | chr3:178913200-178945200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 28 | chr3:178913200-178947000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 29 | chr3:178913200-178947000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 30 | chr3:178913800-178919600 | Weak transcription | Brain Germinal Matrix | brain |
| 31 | chr3:178913800-178954000 | Weak transcription | Fetal Heart | heart |
| 32 | chr3:178913800-178969000 | Weak transcription | Small Intestine | intestine |
| 33 | chr3:178914000-178919600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 34 | chr3:178914000-178919600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 35 | chr3:178914000-178921400 | Weak transcription | Fetal Kidney | kidney |
| 36 | chr3:178914000-178928200 | Weak transcription | Brain Hippocampus Middle | brain |
| 37 | chr3:178914200-178928000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 38 | chr3:178914200-178928000 | Weak transcription | Brain Substantia Nigra | brain |
| 39 | chr3:178914200-178928200 | Weak transcription | Brain Anterior Caudate | brain |
| 40 | chr3:178914600-178919600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 41 | chr3:178914600-178920200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 42 | chr3:178914600-178921400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 43 | chr3:178914600-178945200 | Weak transcription | HMEC | breast |
| 44 | chr3:178914800-178919600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 45 | chr3:178914800-178919600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 46 | chr3:178914800-178919600 | Weak transcription | Thymus | Thymus |
| 47 | chr3:178914800-178919600 | Weak transcription | NHLF | lung |
| 48 | chr3:178914800-178919800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 49 | chr3:178914800-178921800 | Weak transcription | Fetal Brain Male | brain |
| 50 | chr3:178914800-178922000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
