The 2.0 version of rSNPBase

Variant report

Variant rs564584088
Chromosome Location chr11:76188286-76188287
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:76157200-76190200 Weak transcription Placenta Amnion Placenta Amnion
2 chr11:76157200-76191200 Weak transcription Stomach Mucosa stomach
3 chr11:76157400-76190200 Weak transcription Colonic Mucosa Colon
4 chr11:76158200-76190200 Weak transcription H9 Cell Line embryonic stem cell
5 chr11:76159800-76190400 Weak transcription Colon Smooth Muscle Colon
6 chr11:76164800-76188600 Weak transcription Muscle Satellite Cultured Cells --
7 chr11:76166800-76219400 Weak transcription Small Intestine intestine
8 chr11:76167200-76190200 Weak transcription NHLF lung
9 chr11:76167800-76192000 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr11:76168800-76234800 Weak transcription Psoas Muscle Psoas
11 chr11:76171200-76221200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr11:76171400-76190200 Weak transcription Fetal Heart heart
13 chr11:76173400-76191400 Strong transcription Primary monocytes fromperipheralblood blood
14 chr11:76173400-76191600 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr11:76173600-76191600 Strong transcription Primary T helper cells fromperipheralblood blood
16 chr11:76173800-76190000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr11:76174800-76191400 Strong transcription Primary T helper cells PMA-I stimulated --
18 chr11:76175200-76190200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr11:76175400-76190400 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr11:76175800-76190200 Weak transcription Brain Substantia Nigra brain
21 chr11:76177400-76195400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr11:76178000-76190200 Weak transcription A549 lung
23 chr11:76180200-76204200 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr11:76180400-76191000 Weak transcription HSMMtube muscle
25 chr11:76182400-76189200 Strong transcription Brain Germinal Matrix brain
26 chr11:76182800-76192400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr11:76183800-76194400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr11:76184000-76190200 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr11:76184000-76190200 Weak transcription Fetal Brain Male brain
30 chr11:76184000-76190600 Weak transcription Osteobl bone
31 chr11:76184000-76191400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr11:76184200-76190400 Weak transcription NH-A brain
33 chr11:76184200-76191200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr11:76184400-76235000 Weak transcription NHEK skin
35 chr11:76184600-76190200 Weak transcription H1 Cell Line embryonic stem cell
36 chr11:76184600-76190200 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr11:76184600-76190400 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr11:76184800-76190200 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr11:76184800-76190200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr11:76184800-76190400 Weak transcription Brain Cingulate Gyrus brain
41 chr11:76184800-76190400 Weak transcription Pancreas Pancrea
42 chr11:76184800-76191000 Weak transcription Esophagus oesophagus
43 chr11:76184800-76202600 Weak transcription Aorta Aorta
44 chr11:76185000-76189600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr11:76185000-76190200 Weak transcription Brain Anterior Caudate brain
46 chr11:76185000-76190200 Weak transcription Spleen Spleen
47 chr11:76185000-76190400 Weak transcription Gastric stomach
48 chr11:76185000-76191200 Weak transcription Lung lung
49 chr11:76185000-76191600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr11:76185000-76204000 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015