Variant report

Variant	rs564618466
Chromosome Location	chr5:124363466-124363467
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882822	chr5:124250018-124449375	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv830474	chr5:124263628-124431299	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	esv3365202	chr5:124362653-124365251	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
4	esv2541376	chr5:124363227-124364813	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124361000-124363600	Enhancers	Fetal Intestine Large	intestine
2	chr5:124362400-124363600	Enhancers	Adipose Nuclei	Adipose
3	chr5:124362400-124363600	Enhancers	Liver	Liver
4	chr5:124362400-124363600	Enhancers	Rectal Mucosa Donor 29	rectum
5	chr5:124362400-124363600	Enhancers	Rectal Mucosa Donor 31	rectum
6	chr5:124362400-124363800	Enhancers	Fetal Heart	heart
7	chr5:124362600-124363600	Enhancers	Stomach Mucosa	stomach
8	chr5:124363000-124368000	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr5:124363000-124368200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr5:124363400-124363600	Enhancers	Duodenum Mucosa	Duodenum
11	chr5:124363400-124365000	Weak transcription	Pancreas	Pancrea
12	chr5:124363400-124367000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr5:124363400-124367800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
14	chr5:124363400-124367800	Weak transcription	Gastric	stomach
15	chr5:124363400-124377600	Weak transcription	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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