Variant report

Variant	rs564629240
Chromosome Location	chr11:15349626-15349627
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2830370	chr11:15142247-15444094	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv832072	chr11:15226843-15392190	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv1044103	chr11:15345545-15390081	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15348400-15350600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr11:15348400-15350800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr11:15349400-15349800	Enhancers	Fetal Brain Male	brain
4	chr11:15349600-15350000	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr11:15349600-15350000	Enhancers	H1 Cell Line	embryonic stem cell
6	chr11:15349600-15350000	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr11:15349600-15350000	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr11:15349600-15350000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr11:15349600-15350000	Enhancers	Brain Germinal Matrix	brain
10	chr11:15349600-15350200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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