Variant report

Variant	rs564655531
Chromosome Location	chr10:112835504-112835505
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498045	chr10:112794518-113353550	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv825566	chr10:112830014-112871333	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv527400	chr10:112833561-112843085	Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv896004	chr10:112834763-112842961	Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:112829800-112835600	Weak transcription	Pancreas	Pancrea
2	chr10:112831400-112835600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr10:112835400-112835600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr10:112835400-112835600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr10:112835400-112835600	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
6	chr10:112835400-112835600	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr10:112835400-112835600	Bivalent Enhancer	Brain Hippocampus Middle	brain
8	chr10:112835400-112835600	Active TSS	Brain Inferior Temporal Lobe	brain
9	chr10:112835400-112835600	Enhancers	Ovary	ovary
10	chr10:112835400-112835800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
11	chr10:112835400-112835800	Enhancers	Fetal Brain Male	brain
12	chr10:112835400-112835800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
13	chr10:112835400-112836000	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
14	chr10:112835400-112836000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
15	chr10:112835400-112836000	Flanking Active TSS	Fetal Brain Female	brain
16	chr10:112835400-112836000	Bivalent Enhancer	Fetal Heart	heart
17	chr10:112835400-112837000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr10:112835400-112838000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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