The 2.0 version of rSNPBase

Variant report

Variant rs564666458
Chromosome Location chr2:191207739-191207740
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191191600-191208000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191198600-191208000 Weak transcription Aorta Aorta
3 chr2:191198800-191208000 Weak transcription Ovary ovary
4 chr2:191199600-191208000 Weak transcription HMEC breast
5 chr2:191200600-191208000 Weak transcription Left Ventricle heart
6 chr2:191204200-191208000 Enhancers HepG2 liver
7 chr2:191205800-191216200 Weak transcription K562 blood
8 chr2:191206800-191208000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
9 chr2:191206800-191208200 Enhancers Small Intestine intestine
10 chr2:191207000-191207800 Enhancers Primary neutrophils fromperipheralblood blood
11 chr2:191207200-191207800 Enhancers Hela-S3 cervix
12 chr2:191207200-191208000 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
13 chr2:191207200-191208000 Enhancers Brain Substantia Nigra brain
14 chr2:191207200-191208000 Enhancers Fetal Intestine Small intestine
15 chr2:191207200-191208000 Enhancers Fetal Stomach stomach
16 chr2:191207400-191207800 Enhancers H9 Cell Line embryonic stem cell
17 chr2:191207400-191207800 Enhancers Primary hematopoietic stem cells blood
18 chr2:191207400-191207800 Enhancers Colon Smooth Muscle Colon
19 chr2:191207400-191207800 Enhancers Lung lung
20 chr2:191207400-191207800 Enhancers Skeletal Muscle Male skeletal muscle
21 chr2:191207400-191207800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
22 chr2:191207400-191207800 Enhancers A549 lung
23 chr2:191207400-191207800 Enhancers Monocytes-CD14+_RO01746 blood
24 chr2:191207400-191208000 Active TSS ES-I3 Cell Line embryonic stem cell
25 chr2:191207400-191208000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr2:191207400-191208000 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
27 chr2:191207400-191208000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
28 chr2:191207400-191208000 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
29 chr2:191207400-191208000 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
30 chr2:191207400-191208000 Enhancers Primary monocytes fromperipheralblood blood
31 chr2:191207400-191208000 Enhancers Primary T helper cells PMA-I stimulated --
32 chr2:191207400-191208000 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr2:191207400-191208000 Enhancers Liver Liver
34 chr2:191207400-191208000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
35 chr2:191207400-191208000 Enhancers Esophagus oesophagus
36 chr2:191207400-191208000 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr2:191207400-191208000 Enhancers Fetal Muscle Leg muscle
38 chr2:191207400-191208000 Enhancers Placenta Placenta
39 chr2:191207400-191208000 Enhancers Fetal Thymus thymus
40 chr2:191207400-191208000 Enhancers Pancreas Pancrea
41 chr2:191207400-191208000 Enhancers Right Atrium heart
42 chr2:191207400-191208000 Enhancers Right Ventricle heart
43 chr2:191207400-191208000 Enhancers Stomach Mucosa stomach
44 chr2:191207400-191208200 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr2:191207400-191208200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
46 chr2:191207400-191208200 Enhancers Spleen Spleen
47 chr2:191207400-191208800 Active TSS Primary T cells from cord blood blood
48 chr2:191207400-191209200 Active TSS Fetal Kidney kidney
49 chr2:191207400-191209200 Active TSS Osteobl bone
50 chr2:191207400-191210000 Active TSS Rectal Mucosa Donor 29 rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015