The 2.0 version of rSNPBase

Variant report

Variant rs564816859
Chromosome Location chr1:185409833-185409834
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185402400-185410800 Weak transcription Left Ventricle heart
2 chr1:185407000-185412000 Enhancers Primary Natural Killer cells fromperipheralblood blood
3 chr1:185407200-185410600 Weak transcription HUVEC blood vessel
4 chr1:185407400-185412200 Weak transcription Right Atrium heart
5 chr1:185407600-185411400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:185407800-185410200 Enhancers Primary T helper cells PMA-I stimulated --
7 chr1:185407800-185410400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:185407800-185410600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr1:185407800-185411000 Enhancers Primary T helper 17 cells PMA-I stimulated --
10 chr1:185407800-185411400 Enhancers Muscle Satellite Cultured Cells --
11 chr1:185407800-185411600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:185407800-185411600 Enhancers Hela-S3 cervix
13 chr1:185407800-185411800 Enhancers HSMMtube muscle
14 chr1:185408000-185410800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr1:185408000-185411200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:185408200-185411200 Enhancers NHDF-Ad bronchial
17 chr1:185408200-185411600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:185408200-185411600 Enhancers Fetal Intestine Large intestine
19 chr1:185408200-185411600 Enhancers Fetal Intestine Small intestine
20 chr1:185408200-185411600 Enhancers HMEC breast
21 chr1:185408200-185411600 Enhancers NHEK skin
22 chr1:185408200-185411800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:185408200-185411800 Enhancers Placenta Placenta
24 chr1:185408200-185412000 Enhancers Primary T cells fromperipheralblood blood
25 chr1:185408400-185410400 Enhancers A549 lung
26 chr1:185408600-185411600 Enhancers Osteobl bone
27 chr1:185408800-185410400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:185408800-185410400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:185409000-185410400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:185409000-185410600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:185409000-185412000 Enhancers Fetal Heart heart
32 chr1:185409200-185410200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:185409200-185410400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:185409200-185410400 Weak transcription HSMM muscle
35 chr1:185409400-185410400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:185409600-185410000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:185409600-185410000 Weak transcription NH-A brain
38 chr1:185409600-185411600 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr1:185409800-185410200 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:185409800-185410200 Weak transcription Placenta Amnion Placenta Amnion
41 chr1:185409800-185411000 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015