Variant report

Variant	rs564826772
Chromosome Location	chr22:31291382-31291383
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr22:31286283..31288352-chr22:31290397..31292168,2	K562	blood:

Variant related genes	Relation type
ENSG00000184792	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915818	chr22:30708245-31346302	Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
2	esv2500485	chr22:31291011-31294491	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31265200-31299400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr22:31266400-31295200	Weak transcription	Stomach Smooth Muscle	stomach
3	chr22:31274200-31308400	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr22:31277800-31295200	Weak transcription	Fetal Brain Male	brain
5	chr22:31278400-31291800	Weak transcription	HMEC	breast
6	chr22:31278400-31292600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr22:31278400-31301600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr22:31278600-31321400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr22:31278800-31295000	Weak transcription	Small Intestine	intestine
10	chr22:31278800-31301600	Weak transcription	A549	lung
11	chr22:31282200-31294400	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr22:31282800-31294200	Weak transcription	Rectal Smooth Muscle	rectum
13	chr22:31283000-31306600	Weak transcription	Fetal Heart	heart
14	chr22:31283400-31291400	Strong transcription	Brain Germinal Matrix	brain
15	chr22:31283400-31291400	Strong transcription	Fetal Brain Female	brain
16	chr22:31283400-31291600	Strong transcription	Brain Anterior Caudate	brain
17	chr22:31283400-31304000	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr22:31283600-31292800	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr22:31283600-31318400	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr22:31284200-31291800	Strong transcription	NHEK	skin
21	chr22:31284400-31308400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr22:31284600-31293000	Strong transcription	Fetal Lung	lung
23	chr22:31284600-31295200	Weak transcription	Monocytes-CD14+_RO01746	blood
24	chr22:31284800-31306600	Weak transcription	Colonic Mucosa	Colon
25	chr22:31285200-31295000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr22:31286200-31294000	Weak transcription	HepG2	liver
27	chr22:31286200-31294200	Weak transcription	Aorta	Aorta
28	chr22:31286400-31294400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr22:31286400-31299200	Weak transcription	Liver	Liver
30	chr22:31286400-31304000	Weak transcription	Ovary	ovary
31	chr22:31287200-31291600	Strong transcription	Fetal Intestine Large	intestine
32	chr22:31287200-31294200	Strong transcription	Fetal Intestine Small	intestine
33	chr22:31287200-31299200	Weak transcription	Esophagus	oesophagus
34	chr22:31287400-31300400	Weak transcription	Muscle Satellite Cultured Cells	--
35	chr22:31287800-31295000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr22:31288200-31291400	Strong transcription	Placenta	Placenta
37	chr22:31288400-31316400	Weak transcription	Thymus	Thymus
38	chr22:31288600-31291400	Strong transcription	HSMMtube	muscle
39	chr22:31288600-31293800	Strong transcription	Hela-S3	cervix
40	chr22:31289000-31291400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
41	chr22:31289200-31291400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
42	chr22:31289200-31291400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
43	chr22:31289200-31291400	Enhancers	Primary T helper cells fromperipheralblood	blood
44	chr22:31289200-31294400	Weak transcription	HSMM	muscle
45	chr22:31289400-31298600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr22:31289600-31294400	Weak transcription	Duodenum Smooth Muscle	Duodenum
47	chr22:31290000-31294400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr22:31290000-31294600	Weak transcription	Lung	lung
49	chr22:31290000-31294800	Weak transcription	Spleen	Spleen
50	chr22:31290000-31295200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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