Variant report

Variant rs564882838
Chromosome Location chr7:27152824-27152825
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27145800-27162800 Strong transcription Primary hematopoietic stem cells short term culture blood
2 chr7:27146400-27169600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr7:27146800-27159000 Weak transcription Primary hematopoietic stem cells blood
4 chr7:27149000-27153200 Enhancers NHDF-Ad bronchial
5 chr7:27149800-27153000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr7:27150000-27153000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr7:27150000-27153000 Flanking Active TSS NHEK skin
8 chr7:27150000-27153400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr7:27150000-27158400 Active TSS Aorta Aorta
10 chr7:27150400-27153000 Flanking Active TSS HUVEC blood vessel
11 chr7:27150400-27154600 Bivalent/Poised TSS NH-A brain
12 chr7:27151000-27158200 Active TSS Breast Myoepithelial Primary Cells Breast
13 chr7:27151200-27153000 Bivalent/Poised TSS Fetal Brain Male brain
14 chr7:27151200-27153000 Weak transcription Spleen Spleen
15 chr7:27151400-27154000 Active TSS Fetal Stomach stomach
16 chr7:27151400-27155000 Weak transcription HepG2 liver
17 chr7:27151600-27154000 Active TSS NHLF lung
18 chr7:27151600-27156000 Active TSS Fetal Kidney kidney
19 chr7:27151600-27156800 Bivalent/Poised TSS Fetal Lung lung
20 chr7:27151600-27159200 Active TSS Duodenum Smooth Muscle Duodenum
21 chr7:27151800-27153800 Active TSS HMEC breast
22 chr7:27151800-27157000 Active TSS Right Atrium heart
23 chr7:27152000-27154000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr7:27152000-27154000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr7:27152200-27153200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr7:27152200-27153200 Bivalent/Poised TSS Fetal Thymus thymus
27 chr7:27152200-27154000 Active TSS Placenta Amnion Placenta Amnion
28 chr7:27152200-27154000 Active TSS A549 lung
29 chr7:27152400-27153000 Flanking Active TSS Colon Smooth Muscle Colon
30 chr7:27152400-27153000 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
31 chr7:27152400-27153000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
32 chr7:27152400-27153200 Flanking Active TSS Adipose Nuclei Adipose
33 chr7:27152400-27153800 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr7:27152600-27153000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
35 chr7:27152600-27153000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr7:27152600-27153000 Flanking Active TSS Psoas Muscle Psoas
37 chr7:27152600-27153000 Flanking Active TSS Osteobl bone
38 chr7:27152600-27153200 Flanking Active TSS Muscle Satellite Cultured Cells --
39 chr7:27152600-27153200 Flanking Active TSS Colonic Mucosa Colon
40 chr7:27152600-27153200 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
41 chr7:27152600-27153200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
42 chr7:27152600-27153200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
43 chr7:27152600-27153200 Flanking Active TSS Rectal Smooth Muscle rectum
44 chr7:27152600-27153200 Flanking Active TSS Hela-S3 cervix
45 chr7:27152600-27153800 Active TSS Skeletal Muscle Female skeletal muscle
46 chr7:27152600-27154000 Active TSS Stomach Mucosa stomach
47 chr7:27152600-27154000 Active TSS HSMM muscle
48 chr7:27152600-27154600 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
49 chr7:27152600-27154800 Active TSS Fetal Muscle Trunk muscle
50 chr7:27152600-27157800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived

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