Variant report

Variant	rs564894254
Chromosome Location	chr11:32447544-32447545
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv1038188	chr11:32410305-32449799	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv1044547	chr11:32435753-32465233	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	esv2753303	chr11:32447324-32494924	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
5	nsv1051559	chr11:32447347-32465233	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32438800-32447800	Weak transcription	Ovary	ovary
2	chr11:32440800-32448400	Enhancers	Primary hematopoietic stem cells	blood
3	chr11:32443400-32447800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr11:32445400-32447800	Enhancers	Dnd41	blood
5	chr11:32446600-32447600	Genic enhancers	Fetal Kidney	kidney
6	chr11:32446800-32447600	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
7	chr11:32447200-32448400	Genic enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr11:32447400-32447600	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
9	chr11:32447400-32447600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
10	chr11:32447400-32447800	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
11	chr11:32447400-32447800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
12	chr11:32447400-32447800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr11:32447400-32448000	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
14	chr11:32447400-32448000	Bivalent Enhancer	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr11:32447400-32448000	Genic enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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