Variant report

Variant rs564936739
Chromosome Location chr20:24955422-24955423
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24935200-24957600 Strong transcription Liver Liver
2 chr20:24935200-24971800 Weak transcription K562 blood
3 chr20:24936000-24955600 Strong transcription Primary T regulatory cells fromperipheralblood blood
4 chr20:24936400-24956000 Strong transcription Breast Myoepithelial Primary Cells Breast
5 chr20:24936800-24955800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr20:24937400-24957200 Strong transcription HepG2 liver
7 chr20:24938200-24955600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr20:24942000-24972400 Weak transcription Fetal Heart heart
9 chr20:24942800-24961600 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr20:24943200-24965000 Strong transcription Primary T helper cells PMA-I stimulated --
11 chr20:24944400-24955800 Strong transcription Primary hematopoietic stem cells blood
12 chr20:24944400-24958200 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr20:24944800-24960600 Weak transcription Stomach Mucosa stomach
14 chr20:24950000-24966400 Weak transcription Small Intestine intestine
15 chr20:24950800-24961000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr20:24951600-24960400 Genic enhancers Primary neutrophils fromperipheralblood blood
17 chr20:24952600-24957200 Strong transcription Primary B cells from cord blood blood
18 chr20:24952800-24961000 Weak transcription NHDF-Ad bronchial
19 chr20:24953200-24962200 Weak transcription Placenta Amnion Placenta Amnion
20 chr20:24953600-24956200 Strong transcription Primary monocytes fromperipheralblood blood
21 chr20:24953600-24956400 Weak transcription Fetal Lung lung
22 chr20:24953600-24957000 Weak transcription Fetal Kidney kidney
23 chr20:24953600-24958000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr20:24953600-24960400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr20:24953600-24960800 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr20:24953600-24972000 Weak transcription NH-A brain
27 chr20:24953800-24957600 Weak transcription Fetal Brain Male brain
28 chr20:24954000-24956600 Enhancers HUVEC blood vessel
29 chr20:24954000-24957200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr20:24954000-24960600 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr20:24954000-24961000 Weak transcription Colon Smooth Muscle Colon
32 chr20:24954200-24955600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr20:24954200-24955800 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr20:24954200-24956800 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr20:24954200-24957000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr20:24954200-24957000 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr20:24954200-24957000 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr20:24954200-24957000 Weak transcription Osteobl bone
39 chr20:24954200-24957200 Weak transcription H1 Cell Line embryonic stem cell
40 chr20:24954200-24957200 Weak transcription H9 Cell Line embryonic stem cell
41 chr20:24954200-24957200 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr20:24954200-24957400 Weak transcription Brain Cingulate Gyrus brain
43 chr20:24954200-24957400 Weak transcription Brain Substantia Nigra brain
44 chr20:24954200-24958000 Weak transcription Colonic Mucosa Colon
45 chr20:24954200-24958400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr20:24954200-24958600 Weak transcription Muscle Satellite Cultured Cells --
47 chr20:24954200-24958800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr20:24954200-24959800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr20:24954200-24959800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr20:24954200-24960000 Weak transcription Gastric stomach

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