The 2.0 version of rSNPBase

Variant report

Variant rs564979206
Chromosome Location chr5:75785521-75785522
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:75769600-75816600 Weak transcription Primary B cells from cord blood blood
2 chr5:75775000-75785800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr5:75775600-75787600 Weak transcription Gastric stomach
4 chr5:75776200-75785800 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr5:75776200-75787600 Weak transcription Primary monocytes fromperipheralblood blood
6 chr5:75776200-75801000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr5:75776400-75791200 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr5:75776400-75800200 Weak transcription Primary T cells from cord blood blood
9 chr5:75776800-75791000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr5:75778000-75785800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr5:75778400-75793200 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr5:75779200-75785600 Weak transcription Brain Germinal Matrix brain
13 chr5:75780200-75786200 Weak transcription Fetal Intestine Small intestine
14 chr5:75780200-75786200 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr5:75780200-75787400 Weak transcription Placenta Placenta
16 chr5:75780400-75788000 Weak transcription Primary T cells fromperipheralblood blood
17 chr5:75780800-75786800 Weak transcription Primary hematopoietic stem cells blood
18 chr5:75780800-75793400 Weak transcription Small Intestine intestine
19 chr5:75781000-75786000 Weak transcription Duodenum Mucosa Duodenum
20 chr5:75781000-75787400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr5:75781200-75786200 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr5:75781600-75785800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr5:75781600-75786000 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr5:75781600-75786200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr5:75781600-75787600 Weak transcription Colonic Mucosa Colon
26 chr5:75782600-75786000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr5:75782800-75785800 Weak transcription Stomach Mucosa stomach
28 chr5:75783400-75785600 Enhancers HUES48 Cell Line embryonic stem cell
29 chr5:75783400-75785600 Enhancers HUES6 Cell Line embryonic stem cell
30 chr5:75783400-75785800 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr5:75783400-75786200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr5:75783400-75786600 Enhancers H1 Cell Line embryonic stem cell
33 chr5:75783600-75785600 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr5:75783600-75785600 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr5:75783800-75785800 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr5:75783800-75787400 Weak transcription Pancreas Pancrea
37 chr5:75783800-75788200 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr5:75783800-75788800 Enhancers HUES64 Cell Line embryonic stem cell
39 chr5:75784000-75785600 Weak transcription Fetal Lung lung
40 chr5:75784000-75786600 Weak transcription Liver Liver
41 chr5:75784000-75788800 Weak transcription K562 blood
42 chr5:75784000-75791600 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr5:75784200-75789200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr5:75784400-75789400 Enhancers iPS-15b Cell Line embryonic stem cell
45 chr5:75784400-75789800 Enhancers ES-I3 Cell Line embryonic stem cell
46 chr5:75784600-75785600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
47 chr5:75784600-75785800 Enhancers H9 Cell Line embryonic stem cell
48 chr5:75784600-75785800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
49 chr5:75784600-75786600 Weak transcription Fetal Stomach stomach
50 chr5:75784600-75788600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015