Variant report

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019636	chr8:118598433-118946091	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv539734	chr8:118598433-118946091	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv831438	chr8:118679896-118823600	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv891410	chr8:118684994-118730344	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118680000-118685200	Enhancers	HepG2	liver
2	chr8:118680800-118685200	Enhancers	Liver	Liver
3	chr8:118681000-118685200	Enhancers	HMEC	breast
4	chr8:118681400-118685200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:118681400-118685200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr8:118681400-118685200	Enhancers	NHDF-Ad	bronchial
7	chr8:118683600-118685200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr8:118684200-118685200	Enhancers	Osteobl	bone
9	chr8:118684600-118685200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr8:118684600-118685200	Enhancers	Muscle Satellite Cultured Cells	--
11	chr8:118684600-118687000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr8:118684600-118687200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr8:118684800-118687800	Weak transcription	HSMM	muscle
14	chr8:118684800-118688400	Weak transcription	NH-A	brain
15	chr8:118684800-118693600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr8:118685000-118685200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr8:118685000-118685200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr8:118685000-118687000	Weak transcription	NHEK	skin
19	chr8:118685000-118687400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr8:118685000-118694200	Weak transcription	NHLF	lung

Quick Search: