Variant report

Variant	rs565079411
Chromosome Location	chr8:119856295-119856296
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:119854729..119856994-chr8:119963399..119965600,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000164761	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891414	chr8:119755490-119881550	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
3	nsv470234	chr8:119856209-119906530	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119854800-119857200	Enhancers	Hela-S3	cervix
2	chr8:119855000-119856800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr8:119855000-119856800	Enhancers	NHLF	lung
4	chr8:119855000-119857000	Enhancers	HMEC	breast
5	chr8:119855200-119857000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:119855400-119856400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr8:119855400-119856800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:119855400-119856800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr8:119855400-119856800	Enhancers	NHEK	skin
10	chr8:119855400-119857000	Enhancers	NH-A	brain
11	chr8:119855600-119856800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr8:119855600-119856800	Enhancers	HSMM	muscle
13	chr8:119855600-119856800	Enhancers	Osteobl	bone
14	chr8:119855600-119857000	Enhancers	NHDF-Ad	bronchial
15	chr8:119855800-119856600	Enhancers	Muscle Satellite Cultured Cells	--
16	chr8:119855800-119856600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr8:119856000-119856600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr8:119856000-119856800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr8:119856200-119856600	Enhancers	HSMMtube	muscle
20	chr8:119856200-119856800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr8:119856200-119856800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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