The 2.0 version of rSNPBase

Variant report

Variant rs565209787
Chromosome Location chr12:120959356-120959357
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:120935200-120966200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr12:120935600-120966200 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr12:120936000-120964200 Strong transcription Fetal Muscle Trunk muscle
4 chr12:120936400-120963800 Weak transcription Hela-S3 cervix
5 chr12:120936400-120966000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr12:120936400-120966200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr12:120937200-120966000 Weak transcription Psoas Muscle Psoas
8 chr12:120937600-120963600 Strong transcription Fetal Intestine Small intestine
9 chr12:120941800-120964000 Weak transcription HUVEC blood vessel
10 chr12:120942000-120962600 Strong transcription Fetal Adrenal Gland Adrenal Gland
11 chr12:120942400-120959800 Weak transcription Fetal Kidney kidney
12 chr12:120942800-120966200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:120943000-120963800 Weak transcription K562 blood
14 chr12:120943000-120966200 Weak transcription Fetal Heart heart
15 chr12:120945600-120962000 Strong transcription Fetal Muscle Leg muscle
16 chr12:120945800-120963600 Strong transcription Fetal Stomach stomach
17 chr12:120947200-120966000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr12:120948600-120966000 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr12:120951600-120965600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr12:120951800-120961600 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr12:120951800-120962000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr12:120952400-120961200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr12:120953600-120966200 Weak transcription Brain Angular Gyrus brain
24 chr12:120953800-120959800 Weak transcription Brain Inferior Temporal Lobe brain
25 chr12:120954000-120963200 Weak transcription Muscle Satellite Cultured Cells --
26 chr12:120954000-120965800 Weak transcription Small Intestine intestine
27 chr12:120954200-120959800 Weak transcription Brain Substantia Nigra brain
28 chr12:120954200-120960000 Weak transcription HepG2 liver
29 chr12:120954200-120964000 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr12:120954200-120966000 Weak transcription Rectal Smooth Muscle rectum
31 chr12:120954200-120966200 Weak transcription Brain Cingulate Gyrus brain
32 chr12:120954200-120966600 Weak transcription Spleen Spleen
33 chr12:120954400-120959800 Weak transcription Brain Hippocampus Middle brain
34 chr12:120954400-120963800 Weak transcription NHDF-Ad bronchial
35 chr12:120954400-120963800 Weak transcription Osteobl bone
36 chr12:120954400-120964000 Weak transcription NHLF lung
37 chr12:120954400-120966000 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr12:120954400-120966000 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr12:120954400-120966200 Weak transcription Gastric stomach
40 chr12:120954600-120959800 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr12:120954600-120959800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr12:120954600-120960000 Weak transcription Primary T cells from cord blood blood
43 chr12:120954600-120963800 Weak transcription A549 lung
44 chr12:120954600-120964000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr12:120954600-120964200 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr12:120954600-120966000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr12:120954600-120966000 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr12:120954600-120966000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr12:120954600-120966000 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr12:120954600-120966000 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015