The 2.0 version of rSNPBase

Variant report

Variant rs565272930
Chromosome Location chr1:94768031-94768032
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94760600-94770000 Enhancers Primary monocytes fromperipheralblood blood
2 chr1:94761200-94768200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr1:94762000-94769400 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr1:94763400-94775800 Weak transcription Psoas Muscle Psoas
5 chr1:94764800-94771200 Enhancers HUVEC blood vessel
6 chr1:94764800-94772000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:94765000-94768600 Weak transcription Stomach Smooth Muscle stomach
8 chr1:94765200-94768800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:94765800-94768200 Weak transcription Gastric stomach
10 chr1:94765800-94768600 Enhancers Adipose Nuclei Adipose
11 chr1:94765800-94769200 Enhancers Primary neutrophils fromperipheralblood blood
12 chr1:94765800-94770800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:94766000-94768200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:94766000-94770000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:94766000-94770600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:94766000-94772600 Weak transcription Fetal Muscle Leg muscle
17 chr1:94766000-94774600 Weak transcription Fetal Lung lung
18 chr1:94766600-94768400 Enhancers Skeletal Muscle Female skeletal muscle
19 chr1:94766600-94775600 Weak transcription Small Intestine intestine
20 chr1:94767000-94768200 Enhancers Skeletal Muscle Male skeletal muscle
21 chr1:94767000-94768200 Enhancers Spleen Spleen
22 chr1:94767000-94768600 Enhancers Left Ventricle heart
23 chr1:94767000-94768600 Enhancers Lung lung
24 chr1:94767000-94770000 Weak transcription NHLF lung
25 chr1:94767200-94768200 Weak transcription Right Atrium heart
26 chr1:94767200-94768600 Enhancers Right Ventricle heart
27 chr1:94767200-94769400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:94767200-94769400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
29 chr1:94767200-94770000 Weak transcription HepG2 liver
30 chr1:94767200-94770000 Weak transcription Osteobl bone
31 chr1:94767200-94770200 Weak transcription NH-A brain
32 chr1:94767200-94775400 Weak transcription Liver Liver
33 chr1:94767400-94769400 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:94767400-94769400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:94767400-94769400 Weak transcription NHEK skin
36 chr1:94767400-94769600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:94767400-94773400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:94767600-94768200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:94767800-94768200 Enhancers Primary B cells from cord blood blood
40 chr1:94767800-94768200 Weak transcription NHDF-Ad bronchial
41 chr1:94767800-94769400 Weak transcription HMEC breast
42 chr1:94767800-94769800 Enhancers Primary hematopoietic stem cells blood
43 chr1:94767800-94769800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:94768000-94768400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:94768000-94768400 Enhancers Ovary ovary
46 chr1:94768000-94768400 Enhancers Pancreas Pancrea
47 chr1:94768000-94770000 Enhancers Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015