The 2.0 version of rSNPBase

Variant report

Variant rs565352262
Chromosome Location chr9:96277366-96277367
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:96229600-96286200 Weak transcription Fetal Brain Male brain
2 chr9:96243000-96288000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr9:96260800-96290800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr9:96262200-96289000 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr9:96263200-96285800 Weak transcription H9 Cell Line embryonic stem cell
6 chr9:96263200-96287600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr9:96263200-96290200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr9:96263400-96289000 Weak transcription Fetal Kidney kidney
9 chr9:96263600-96280200 Weak transcription Placenta Amnion Placenta Amnion
10 chr9:96264000-96280400 Weak transcription Colonic Mucosa Colon
11 chr9:96264000-96281600 Weak transcription Aorta Aorta
12 chr9:96264000-96286600 Weak transcription NH-A brain
13 chr9:96264200-96281800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr9:96264200-96288400 Weak transcription HSMMtube muscle
15 chr9:96265800-96278400 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr9:96265800-96286200 Weak transcription HUVEC blood vessel
17 chr9:96265800-96286400 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr9:96266000-96279800 Weak transcription HSMM muscle
19 chr9:96266600-96279200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr9:96267200-96279200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr9:96267200-96279800 Weak transcription NHDF-Ad bronchial
22 chr9:96268000-96278600 Weak transcription Liver Liver
23 chr9:96268000-96286400 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr9:96268400-96279200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr9:96268600-96279200 Weak transcription Hela-S3 cervix
26 chr9:96268600-96279800 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr9:96268600-96282200 Weak transcription Osteobl bone
28 chr9:96268800-96278800 Weak transcription Stomach Smooth Muscle stomach
29 chr9:96270200-96278400 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr9:96270400-96279200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr9:96270800-96285400 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr9:96270800-96291600 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr9:96271600-96278400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr9:96271600-96282200 Weak transcription H1 Cell Line embryonic stem cell
35 chr9:96271800-96278400 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr9:96272000-96279200 Weak transcription HMEC breast
37 chr9:96273400-96277400 Enhancers Fetal Heart heart
38 chr9:96273800-96286600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr9:96274000-96277800 Strong transcription Dnd41 blood
40 chr9:96274000-96279000 Weak transcription HepG2 liver
41 chr9:96274000-96279800 Weak transcription Brain Cingulate Gyrus brain
42 chr9:96274000-96291000 Weak transcription Small Intestine intestine
43 chr9:96274200-96278400 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr9:96274200-96279000 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr9:96274200-96279000 Weak transcription A549 lung
46 chr9:96274200-96280000 Weak transcription Rectal Smooth Muscle rectum
47 chr9:96274600-96278800 Weak transcription Placenta Placenta
48 chr9:96274600-96279000 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr9:96274600-96279400 Weak transcription Muscle Satellite Cultured Cells --
50 chr9:96274600-96279600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015