Variant report

Variant	rs565447999
Chromosome Location	chr11:65268124-65268125
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:334)
CpG islands
(count:61)
Chromatin interactive
region (count:63)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:334 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NFATC1	chr11:65265739-65275670	GM12878	blood:	n/a	n/a
2	POLR2A	chr11:65263137-65276123	GM12878	blood:	n/a	n/a
3	POU2F2	chr11:65267380-65271049	GM12878	blood:	n/a	chr11:65269590-65269603
4	JUND	chr11:65267670-65275728	SK-N-SH	brain:	n/a	chr11:65268773-65268780 chr11:65269411-65269418 chr11:65268675-65268684 chr11:65268773-65268781 chr11:65268774-65268785
5	NFATC1	chr11:65264330-65275640	GM12878	blood:	n/a	n/a
6	CTCF	chr11:65268080-65268230	HEEpiC	esophagus:	n/a	n/a
7	ETS1	chr11:65267796-65268533	K562	blood:	n/a	n/a
8	MEF2A	chr11:65267481-65268149	K562	blood:	n/a	chr11:65267613-65267628 chr11:65267657-65267668 chr11:65267819-65267834 chr11:65267655-65267670
9	TEAD4	chr11:65264291-65275467	K562	blood:	n/a	chr11:65272376-65272385
10	SP4	chr11:65267880-65268591	H1-hESC	embryonic stem cell:	n/a	n/a
11	TBP	chr11:65264605-65268574	Hela-S3	cervix:	n/a	n/a
12	POLR2A	chr11:65267435-65269742	HepG2	liver:	n/a	n/a
13	POU2F2	chr11:65267493-65269786	GM12878	blood:	n/a	chr11:65269590-65269603
14	POLR2A	chr11:65264226-65275445	GM18526	blood:	n/a	n/a
15	MYC	chr11:65268071-65268238	MCF-7	breast:	n/a	n/a
16	USF2	chr11:65267942-65268242	GM12878	blood:	n/a	n/a
17	POLR2A	chr11:65264364-65275556	GM18951	blood:	n/a	n/a
18	ELF1	chr11:65267760-65268606	GM12878	blood:	n/a	chr11:65268365-65268376 chr11:65268366-65268375
19	POLR2A	chr11:65264336-65276216	Hela-S3	cervix:	n/a	n/a
20	POLR2A	chr11:65267809-65268510	HUVEC	blood vessel:	n/a	n/a
21	MXI1	chr11:65265955-65275405	K562	blood:	n/a	n/a
22	POLR2A	chr11:65263707-65276561	K562	blood:	n/a	n/a
23	POLR2A	chr11:65263591-65276127	GM12878	blood:	n/a	n/a
24	HEY1	chr11:65263782-65276303	K562	blood:	n/a	chr11:65265117-65265132 chr11:65265814-65265829
25	RCOR1	chr11:65267584-65268342	Hela-S3	cervix:	n/a	n/a
26	POLR2A	chr11:65264531-65276415	HUVEC	blood vessel:	n/a	n/a
27	POLR2A	chr11:65264092-65275559	GM12891	blood:	n/a	n/a
28	POU2F2	chr11:65267483-65269914	GM12878	blood:	n/a	chr11:65269590-65269603
29	MAZ	chr11:65267813-65268271	K562	blood:	n/a	n/a
30	HEY1	chr11:65267378-65269418	HepG2	liver:	n/a	n/a
31	YY1	chr11:65267784-65268242	K562	blood:	n/a	n/a
32	ATF2	chr11:65267481-65275471	H1-hESC	embryonic stem cell:	n/a	n/a
33	ATF2	chr11:65264270-65275525	GM12878	blood:	n/a	n/a
34	ELF1	chr11:65267542-65269013	A549	lung:	n/a	chr11:65268365-65268376 chr11:65268366-65268375 chr11:65267600-65267611
35	TAF1	chr11:65267412-65269910	SK-N-SH	brain:	n/a	n/a
36	HCFC1	chr11:65267848-65268244	K562	blood:	n/a	n/a
37	BHLHE40	chr11:65267924-65268356	K562	blood:	n/a	n/a
38	USF2	chr11:65267733-65268445	K562	blood:	n/a	n/a
39	ELF1	chr11:65267297-65271099	HCT-116	colon:	n/a	chr11:65268365-65268376 chr11:65268366-65268375 chr11:65267600-65267611
40	MAZ	chr11:65267936-65268363	Hela-S3	cervix:	n/a	n/a
41	TCF3	chr11:65267808-65268259	GM12878	blood:	n/a	n/a
42	ZMIZ1	chr11:65264328-65275427	K562	blood:	n/a	n/a
43	POLR2A	chr11:65265184-65269659	HCT-116	colon:	n/a	n/a
44	MBD4	chr11:65267781-65268395	HepG2	liver:	n/a	n/a
45	NR2F2	chr11:65267423-65271063	K562	blood:	n/a	n/a
46	MAFK	chr11:65266036-65270234	K562	blood:	n/a	n/a
47	POLR2A	chr11:65264332-65276593	MCF10A-Er-Src	breast:	n/a	n/a
48	STAT5A	chr11:65267402-65275514	K562	blood:	n/a	chr11:65269024-65269036 chr11:65268086-65268095 chr11:65271728-65271737 chr11:65275165-65275176 chr11:65267921-65267930 chr11:65271269-65271277 chr11:65268382-65268393 chr11:65269696-65269704 chr11:65268087-65268096 chr11:65269018-65269030 chr11:65273912-65273920 chr11:65271727-65271736 chr11:65267922-65267931 chr11:65271556-65271568 chr11:65271725-65271739 chr11:65267919-65267933 chr11:65272939-65272951 chr11:65274221-65274233 chr11:65274738-65274750 chr11:65271417-65271424 chr11:65267922-65267945
49	POLR2A	chr11:65264125-65276206	K562	blood:	n/a	n/a
50	TAF1	chr11:65267745-65268430	GM12891	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:65268100-65268150	Caco-2	colon:	n/a
2	chr11:65268100-65268150	HEK293	kidney:	embryo
3	chr11:65268100-65268150	HCT-116	colon:	n/a
4	chr11:65268100-65268150	AG04449	skin:	fetal
5	chr11:65268100-65268150	SAEC	small airway:	n/a
6	chr11:65268100-65268150	RPTEC	kidney:	n/a
7	chr11:65268100-65268150	AG09309	skin:	n/a
8	chr11:65268100-65268150	GM12891	blood:	n/a
9	chr11:65268100-65268150	HAEpiC	amniotic membrane:	n/a
10	chr11:65268100-65268150	Hela-S3	cervix:	n/a
11	chr11:65268100-65268150	ovcar-3	ovarian:	n/a
12	chr11:65268100-65268150	GM19239	blood:	n/a
13	chr11:65268100-65268150	LNCaP	prostate:	n/a
14	chr11:65268100-65268150	ECC-1	luminal epithelium:	n/a
15	chr11:65268100-65268150	PrEC	prostate:	n/a
16	chr11:65268100-65268150	IMR90	lung:	fetal
17	chr11:65268100-65268150	GM06990	blood:	n/a
18	chr11:65268100-65268150	A549	lung:	n/a
19	chr11:65268100-65268150	Hepatocyte	liver:	n/a
20	chr11:65268100-65268150	GM12878	blood:	n/a
21	chr11:65268100-65268150	U87	brain:	n/a
22	chr11:65268100-65268150	BE2_C	brain:	n/a
23	chr11:65268100-65268150	NHDF-neo	bronchial:	n/a
24	chr11:65268100-65268150	HUVEC	blood vessel:	n/a
25	chr11:65268100-65268150	ProgFib	skin:	n/a
26	chr11:65268100-65268150	HMEC	breast:	n/a
27	chr11:65268100-65268150	PANC-1	pancreas:	n/a
28	chr11:65268100-65268150	HRPEpiC	eye:	n/a
29	chr11:65268100-65268150	AG10803	skin:	n/a
30	chr11:65268100-65268150	NB4	blood:	n/a
31	chr11:65268100-65268150	NHBE	bronchial:	n/a
32	chr11:65268100-65268150	HCPEpiC	choroid plexus:	n/a
33	chr11:65268100-65268150	BJ	skin:	n/a
34	chr11:65268100-65268150	HL-60	blood:	n/a
35	chr11:65268100-65268150	HEEpiC	esophagus:	n/a
36	chr11:65268100-65268150	K562	blood:	n/a
37	chr11:65268100-65268150	NT2-D1	testis:	n/a
38	chr11:65268100-65268150	HIPEpiC	eye:	n/a
39	chr11:65268100-65268150	AoSMC	blood vessel:	n/a
40	chr11:65268100-65268150	H1-hESC	embryonic stem cell:	embryo
41	chr11:65268100-65268150	AG04450	lung:	fetal
42	chr11:65268100-65268150	GM12892	blood:	n/a
43	chr11:65268100-65268150	HCM	heart:	n/a
44	chr11:65268100-65268150	T-47D	breast:	n/a
45	chr11:65268100-65268150	Jurkat	blood:	n/a
46	chr11:65268100-65268150	AG09319	gingival:	n/a
47	chr11:65268100-65268150	HRE	kidney:	n/a
48	chr11:65268100-65268150	HepG2	liver:	n/a
49	chr11:65268100-65268150	HRCEpiC	kidney:	n/a
50	chr11:65268100-65268150	SK-N-SH	brain:	n/a

(count:63 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:65263786..65274103-chr11:65335962..65346813,28	MCF-7	breast:
2	chr11:65027906..65030927-chr11:65265746..65268595,3	K562	blood:
3	chr11:65265142..65268654-chr11:65382786..65385771,3	K562	blood:
4	chr11:47290642..47291176-chr11:65267756..65268602,2	Hela-S3	cervix:
5	chr11:8703751..8704539-chr11:65267907..65268817,2	Hela-S3	cervix:
6	chr11:65265213..65268666-chr11:65347350..65349518,3	K562	blood:
7	chr11:65178877..65218546-chr11:65218612..65286191,1014	K562	blood:
8	chr11:65195513..65196498-chr11:65267273..65268224,2	MCF-7	breast:
9	chr11:65265849..65268250-chr11:65311884..65313858,2	K562	blood:
10	chr11:65267720..65269993-chr17:56735066..56736921,2	MCF-7	breast:
11	chr1:156084452..156085046-chr11:65267744..65268530,2	Hela-S3	cervix:
12	chr11:65264952..65268870-chr11:65322730..65327860,7	K562	blood:
13	chr11:65264270..65268654-chr11:65380562..65385771,6	K562	blood:
14	chr11:65265849..65268238-chr11:65310772..65313384,2	K562	blood:
15	chr1:43319444..43320112-chr11:65268112..65268900,2	Hela-S3	cervix:
16	chr11:65267848..65268630-chr5:40834730..40835407,2	Hela-S3	cervix:
17	chr11:65267398..65269156-chr11:65301423..65304394,2	K562	blood:
18	chr11:62649239..62650908-chr11:65266564..65269324,2	MCF-7	breast:
19	chr11:65267717..65268326-chr19:36248288..36249242,2	Hela-S3	cervix:
20	chr11:65267483..65268266-chr6:30688037..30688778,2	Hela-S3	cervix:
21	chr11:65266733..65269505-chr5:137805984..137808464,2	K562	blood:
22	chr11:65264479..65268560-chr11:65318003..65330456,22	MCF-7	breast:
23	chr11:65192598..65193366-chr11:65267842..65268343,2	MCF-7	breast:
24	chr11:65267593..65268286-chr6:134489835..134490681,2	Hela-S3	cervix:
25	chr11:65265253..65270298-chr11:65311800..65316872,7	MCF-7	breast:
26	chr11:65267707..65268645-chr19:14628250..14629226,2	Hela-S3	cervix:
27	chr11:65028393..65029895-chr11:65267379..65269101,2	MCF-7	breast:
28	chr11:65267659..65268626-chr18:12883714..12884414,2	Hela-S3	cervix:
29	chr11:65266263..65268458-chr2:70313687..70315932,2	MCF-7	breast:
30	chr11:65263855..65269766-chr11:65381384..65386650,8	MCF-7	breast:
31	chr11:65267533..65268329-chr16:4818217..4818721,2	Hela-S3	cervix:
32	chr11:65267828..65268621-chr17:56413156..56413870,2	NB4	blood:
33	chr11:65082453..65085480-chr11:65264257..65268362,4	K562	blood:
34	chr11:65266734..65269086-chr11:65319017..65321305,2	K562	blood:
35	chr11:65265519..65268230-chr3:161089523..161091817,2	MCF-7	breast:
36	chr11:65116402..65157784-chr11:65261420..65278410,154	K562	blood:
37	chr11:65268058..65268822-chr3:155588132..155588842,2	Hela-S3	cervix:
38	chr11:65267975..65268625-chr22:50964079..50964599,2	Hela-S3	cervix:
39	chr11:65265516..65268533-chr11:65323156..65327547,5	MCF-7	breast:
40	chr11:65267827..65268361-chr11:118889100..118889985,2	Hela-S3	cervix:
41	chr11:505786..507824-chr11:65267257..65269152,2	K562	blood:
42	chr11:65266509..65268615-chr9:140145540..140148138,2	MCF-7	breast:
43	chr11:65267953..65268779-chr20:60982111..60982665,2	Hela-S3	cervix:
44	chr11:64887509..64889664-chr11:65266185..65268284,2	MCF-7	breast:
45	chr11:65265725..65268508-chr12:123341267..123343973,2	MCF-7	breast:
46	chr11:65262109..65269742-chr11:65336183..65344125,16	MCF-7	breast:
47	chr11:64946026..64951451-chr11:65265686..65269219,7	MCF-7	breast:
48	chr11:65267749..65268432-chr17:80376223..80377054,2	HCT-116	colon:
49	chr11:65266424..65268793-chr11:65386663..65388742,2	K562	blood:
50	chr11:65266409..65268199-chr11:65625346..65627326,2	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LTBP3-2	chr11:65267107-65268493	XLOC_009474
2	lnc-LTBP3-2	chr11:65266414-65270101	XLOC_009474
3	lnc-LTBP3-2	chr11:65266538-65270108	XLOC_009474
4	lnc-LTBP3-2	chr11:65266959-65271093	NONHSAT022147

No data

Variant related genes	Relation type
MALAT1	TF binding region
ENSG00000270117	TF binding region
MALAT1	CpG island
ENSG00000270117	CpG island
ENSG00000173327	Chromatin interaction
ENSG00000145592	Chromatin interaction
ENSG00000166441	Chromatin interaction
ENSG00000172757	Chromatin interaction
ENSG00000254614	Chromatin interaction
ENSG00000168056	Chromatin interaction
ENSG00000175354	Chromatin interaction
ENSG00000173442	Chromatin interaction
ENSG00000254501	Chromatin interaction
ENSG00000169564	Chromatin interaction
ENSG00000273391	Chromatin interaction
ENSG00000163655	Chromatin interaction
ENSG00000176973	Chromatin interaction
ENSG00000260233	Chromatin interaction
ENSG00000266398	Chromatin interaction
ENSG00000202077	Chromatin interaction
ENSG00000245532	Chromatin interaction
ENSG00000149792	Chromatin interaction
ENSG00000132002	Chromatin interaction
ENSG00000160789	Chromatin interaction
ENSG00000130489	Chromatin interaction
ENSG00000130787	Chromatin interaction
ENSG00000173465	Chromatin interaction
ENSG00000196542	Chromatin interaction
ENSG00000202408	Chromatin interaction
ENSG00000173825	Chromatin interaction
ENSG00000197768	Chromatin interaction
ENSG00000023191	Chromatin interaction
ENSG00000149806	Chromatin interaction
ENSG00000167595	Chromatin interaction
ENSG00000264399	Chromatin interaction
ENSG00000014216	Chromatin interaction
ENSG00000168003	Chromatin interaction
ENSG00000124198	Chromatin interaction
ENSG00000181396	Chromatin interaction
ENSG00000149798	Chromatin interaction
ENSG00000179818	Chromatin interaction
ENSG00000123975	Chromatin interaction
ENSG00000197136	Chromatin interaction
ENSG00000196230	Chromatin interaction
ENSG00000196655	Chromatin interaction
ENSG00000126391	Chromatin interaction
ENSG00000162241	Chromatin interaction
ENSG00000149809	Chromatin interaction
ENSG00000146963	Chromatin interaction
ENSG00000142186	Chromatin interaction
ENSG00000149679	Chromatin interaction
ENSG00000004776	Chromatin interaction
ENSG00000014138	Chromatin interaction
ENSG00000132334	Chromatin interaction
ENSG00000110514	Chromatin interaction
ENSG00000118181	Chromatin interaction
ENSG00000255478	Chromatin interaction
ENSG00000169660	Chromatin interaction

Extended variants
information (count: 23 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897715	chr11:65083491-65427346	Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	984 gene(s)	inside rSNPs	diseases
2	nsv897716	chr11:65083491-65481166	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	999 gene(s)	inside rSNPs	diseases
3	nsv541065	chr11:65117387-65271894	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Enhancers Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	835 gene(s)	inside rSNPs	diseases
4	esv1829999	chr11:65136686-65343124	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	963 gene(s)	inside rSNPs	diseases
5	nsv897717	chr11:65140209-65278461	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	942 gene(s)	inside rSNPs	diseases
6	nsv897718	chr11:65140209-65577516	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1003 gene(s)	inside rSNPs	diseases
7	nsv541066	chr11:65142779-65271894	Active TSS Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	833 gene(s)	inside rSNPs	diseases
8	nsv541067	chr11:65142779-65313799	Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	950 gene(s)	inside rSNPs	diseases
9	nsv541068	chr11:65142779-65331136	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	953 gene(s)	inside rSNPs	diseases
10	nsv541069	chr11:65142779-65368787	Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	965 gene(s)	inside rSNPs	diseases
11	nsv541070	chr11:65142779-65397058	Flanking Active TSS Active TSS Enhancers Genic enhancers Bivalent Enhancer Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	972 gene(s)	inside rSNPs	diseases
12	nsv541071	chr11:65142779-65429352	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	984 gene(s)	inside rSNPs	diseases
13	nsv897719	chr11:65157094-65335705	Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	949 gene(s)	inside rSNPs	diseases
14	nsv541072	chr11:65171202-65313799	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	946 gene(s)	inside rSNPs	diseases
15	nsv541073	chr11:65171202-65331136	Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	949 gene(s)	inside rSNPs	diseases
16	nsv541074	chr11:65171202-65368787	Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	961 gene(s)	inside rSNPs	diseases
17	nsv541075	chr11:65210592-65331136	Genic enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	620 gene(s)	inside rSNPs	diseases
18	nsv541076	chr11:65210592-65397058	Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	645 gene(s)	inside rSNPs	diseases
19	nsv897720	chr11:65213434-65445950	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	665 gene(s)	inside rSNPs	diseases
20	nsv555210	chr11:65266169-65287251	Transcr. at gene 5' and 3' Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	574 gene(s)	inside rSNPs	diseases
21	esv20791	chr11:65266587-65273530	Strong transcription Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	516 gene(s)	inside rSNPs	diseases
22	esv18676	chr11:65267136-65270528	ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	289 gene(s)	inside rSNPs	diseases
23	nsv972927	chr11:65267786-65270312	Transcr. at gene 5' and 3' Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	268 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:65263600-65271600	Active TSS	Right Ventricle	heart
2	chr11:65264400-65269000	Active TSS	Sigmoid Colon	Sigmoid Colon
3	chr11:65264600-65269600	Bivalent/Poised TSS	HepG2	liver
4	chr11:65264600-65271800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr11:65264600-65272800	Active TSS	Psoas Muscle	Psoas
6	chr11:65264800-65268200	Active TSS	Fetal Kidney	kidney
7	chr11:65264800-65268400	Active TSS	Primary T cells from cord blood	blood
8	chr11:65264800-65268400	Active TSS	Brain Cingulate Gyrus	brain
9	chr11:65264800-65268800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
10	chr11:65264800-65268800	Active TSS	GM12878-XiMat	blood
11	chr11:65264800-65268800	Active TSS	HSMMtube	muscle
12	chr11:65264800-65269000	Active TSS	Liver	Liver
13	chr11:65264800-65269000	Active TSS	Fetal Stomach	stomach
14	chr11:65264800-65270400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr11:65264800-65272200	Active TSS	Fetal Intestine Small	intestine
16	chr11:65265000-65268600	Active TSS	Stomach Mucosa	stomach
17	chr11:65265000-65268800	Active TSS	Placenta Amnion	Placenta Amnion
18	chr11:65265000-65269000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr11:65265000-65269000	Active TSS	Rectal Mucosa Donor 31	rectum
20	chr11:65265200-65270400	Active TSS	Lung	lung
21	chr11:65265200-65270400	Active TSS	Ovary	ovary
22	chr11:65265200-65270800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr11:65265400-65272000	ZNF genes & repeats	Fetal Brain Male	brain
24	chr11:65265600-65268800	Active TSS	Adipose Nuclei	Adipose
25	chr11:65266000-65268800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr11:65266000-65269000	Active TSS	Primary neutrophils fromperipheralblood	blood
27	chr11:65266000-65269000	Active TSS	Fetal Muscle Trunk	muscle
28	chr11:65266200-65268800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr11:65266200-65268800	Active TSS	Fetal Intestine Large	intestine
30	chr11:65266200-65269200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr11:65266200-65270200	Active TSS	Placenta	Placenta
32	chr11:65266400-65268200	Active TSS	Hela-S3	cervix
33	chr11:65266400-65268600	Active TSS	Primary hematopoietic stem cells short term culture	blood
34	chr11:65266400-65268800	Active TSS	HUVEC	blood vessel
35	chr11:65266400-65269000	Active TSS	Fetal Adrenal Gland	Adrenal Gland
36	chr11:65266800-65272400	ZNF genes & repeats	Fetal Heart	heart
37	chr11:65266800-65274000	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
38	chr11:65266800-65274200	Transcr. at gene 5' and 3'	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr11:65267000-65269000	Active TSS	Small Intestine	intestine
40	chr11:65267000-65273600	Transcr. at gene 5' and 3'	Fetal Lung	lung
41	chr11:65267000-65273800	Transcr. at gene 5' and 3'	Primary T cells effector/memory enriched fromperipheralblood	blood
42	chr11:65267000-65273800	Transcr. at gene 5' and 3'	Monocytes-CD14+_RO01746	blood
43	chr11:65267000-65274200	Transcr. at gene 5' and 3'	Primary monocytes fromperipheralblood	blood
44	chr11:65267200-65273600	Transcr. at gene 5' and 3'	Primary T helper memory cells from peripheral blood 1	blood
45	chr11:65267200-65273800	Transcr. at gene 5' and 3'	K562	blood
46	chr11:65267200-65274000	Transcr. at gene 5' and 3'	Dnd41	blood
47	chr11:65267200-65274200	Transcr. at gene 5' and 3'	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr11:65267400-65273800	Transcr. at gene 5' and 3'	NHEK	skin
49	chr11:65267400-65273800	Transcr. at gene 5' and 3'	Osteobl	bone
50	chr11:65267400-65274000	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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