The 2.0 version of rSNPBase

Variant report

Variant rs565536475
Chromosome Location chr5:145160728-145160729
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145105400-145179000 Weak transcription Pancreas Pancrea
2 chr5:145109400-145194400 Weak transcription Colonic Mucosa Colon
3 chr5:145111400-145166800 Weak transcription K562 blood
4 chr5:145114000-145163400 Weak transcription Small Intestine intestine
5 chr5:145139000-145165400 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr5:145141200-145194400 Weak transcription Stomach Smooth Muscle stomach
7 chr5:145142400-145162400 Weak transcription Rectal Smooth Muscle rectum
8 chr5:145147400-145161800 Weak transcription Lung lung
9 chr5:145148800-145166600 Weak transcription Fetal Heart heart
10 chr5:145152000-145167200 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr5:145152200-145171000 Weak transcription Stomach Mucosa stomach
12 chr5:145154600-145166600 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr5:145154600-145169600 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr5:145155400-145167200 Weak transcription Right Atrium heart
15 chr5:145156000-145171400 Weak transcription Aorta Aorta
16 chr5:145156400-145166000 Weak transcription Fetal Lung lung
17 chr5:145156400-145167200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr5:145157000-145161400 Weak transcription HepG2 liver
19 chr5:145157000-145167000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr5:145157000-145167800 Weak transcription NH-A brain
21 chr5:145157200-145161000 Weak transcription Adipose Nuclei Adipose
22 chr5:145157200-145161400 Weak transcription Duodenum Mucosa Duodenum
23 chr5:145157200-145161600 Weak transcription Ovary ovary
24 chr5:145157200-145166800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr5:145157400-145167200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr5:145157600-145167200 Weak transcription Left Ventricle heart
27 chr5:145158400-145161400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:145158400-145164200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr5:145158400-145167600 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr5:145158400-145171400 Weak transcription Fetal Stomach stomach
31 chr5:145158400-145176800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr5:145158400-145177000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr5:145158400-145179000 Weak transcription Gastric stomach
34 chr5:145158400-145196400 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr5:145158400-145207000 Weak transcription Esophagus oesophagus
36 chr5:145158600-145161400 Weak transcription Fetal Intestine Large intestine
37 chr5:145158600-145161600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr5:145158600-145161800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr5:145158600-145161800 Weak transcription Fetal Intestine Small intestine
40 chr5:145158600-145165200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr5:145158600-145165400 Weak transcription Primary hematopoietic stem cells blood
42 chr5:145158600-145165400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr5:145159800-145162000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr5:145160000-145161000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr5:145160000-145162000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
46 chr5:145160400-145160800 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr5:145160400-145160800 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr5:145160400-145161000 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr5:145160400-145161000 Enhancers Brain Substantia Nigra brain
50 chr5:145160400-145161800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015