Variant report

Variant	rs565705826
Chromosome Location	chr3:100518462-100518463
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1796184	chr3:100507827-100522384	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv591170	chr3:100514481-100522220	Enhancers Genic enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv1795329	chr3:100514481-100522384	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv1803695	chr3:100514481-100522384	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv591171	chr3:100516767-100522220	Enhancers Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv591172	chr3:100516767-100522384	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100475600-100520000	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr3:100494800-100523400	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr3:100502200-100518600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr3:100502400-100530400	Weak transcription	Colon Smooth Muscle	Colon
5	chr3:100505200-100558200	Weak transcription	Ovary	ovary
6	chr3:100505200-100582800	Weak transcription	Fetal Muscle Trunk	muscle
7	chr3:100506000-100548400	Weak transcription	Stomach Smooth Muscle	stomach
8	chr3:100513600-100523000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr3:100514200-100547600	Weak transcription	Fetal Muscle Leg	muscle
10	chr3:100514400-100529000	Weak transcription	HSMMtube	muscle
11	chr3:100515200-100518800	Enhancers	Fetal Stomach	stomach
12	chr3:100515400-100521800	Enhancers	NHDF-Ad	bronchial
13	chr3:100515600-100519200	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr3:100515600-100522600	Weak transcription	Osteobl	bone
15	chr3:100516000-100523000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr3:100516000-100572200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr3:100516400-100519200	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr3:100517200-100518800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr3:100517400-100518600	Weak transcription	NHEK	skin
20	chr3:100517400-100523400	Weak transcription	HSMM	muscle
21	chr3:100517400-100594400	Weak transcription	Duodenum Smooth Muscle	Duodenum
22	chr3:100518200-100519000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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