Variant report

Variant rs565775989
Chromosome Location chr2:187409460-187409461
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187405200-187411800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr2:187406000-187410000 Weak transcription H9 Cell Line embryonic stem cell
3 chr2:187406600-187412000 Enhancers HMEC breast
4 chr2:187407000-187410000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr2:187407800-187410800 Enhancers Stomach Mucosa stomach
6 chr2:187407800-187411000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr2:187408200-187409600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr2:187408200-187409600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr2:187408200-187409600 Flanking Active TSS Muscle Satellite Cultured Cells --
10 chr2:187408200-187409600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr2:187408200-187409600 Enhancers Colon Smooth Muscle Colon
12 chr2:187408200-187409800 Enhancers Cortex derived primary cultured neurospheres brain
13 chr2:187408200-187412000 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr2:187408200-187412200 Enhancers Hela-S3 cervix
15 chr2:187408400-187409600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr2:187408400-187410600 Weak transcription Placenta Placenta
17 chr2:187408400-187411400 Enhancers HUES48 Cell Line embryonic stem cell
18 chr2:187408400-187411400 Enhancers iPS-15b Cell Line embryonic stem cell
19 chr2:187408400-187411600 Enhancers HUES64 Cell Line embryonic stem cell
20 chr2:187408400-187412000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr2:187408600-187409600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr2:187408600-187409600 Enhancers Fetal Heart heart
23 chr2:187408600-187409600 Flanking Active TSS NHEK skin
24 chr2:187408600-187409800 Enhancers Rectal Smooth Muscle rectum
25 chr2:187408600-187411000 Enhancers H1 Cell Line embryonic stem cell
26 chr2:187408600-187411400 Enhancers iPS-18 Cell Line embryonic stem cell
27 chr2:187408800-187409600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
28 chr2:187408800-187409600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:187408800-187409600 Enhancers Fetal Kidney kidney
30 chr2:187408800-187409600 Flanking Active TSS Osteobl bone
31 chr2:187408800-187410400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr2:187408800-187410600 Weak transcription Psoas Muscle Psoas
33 chr2:187408800-187410800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr2:187408800-187412200 Enhancers HSMM muscle
35 chr2:187409000-187409800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr2:187409000-187410000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr2:187409000-187410000 Weak transcription Adipose Nuclei Adipose
38 chr2:187409000-187410400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr2:187409000-187410800 Enhancers HepG2 liver
40 chr2:187409200-187409600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:187409200-187409600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:187409200-187410000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:187409200-187410400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr2:187409200-187410800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr2:187409200-187411200 Enhancers HUES6 Cell Line embryonic stem cell
46 chr2:187409200-187411200 Enhancers HSMMtube muscle
47 chr2:187409200-187412000 Enhancers NH-A brain
48 chr2:187409400-187409600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr2:187409400-187409800 Flanking Active TSS HUVEC blood vessel
50 chr2:187409400-187410400 Weak transcription Fetal Lung lung

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