The 2.0 version of rSNPBase

Variant report

Variant rs565852875
Chromosome Location chr8:59736395-59736396
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59714600-59746000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr8:59715000-59742400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr8:59715200-59757400 Weak transcription Fetal Intestine Large intestine
4 chr8:59720600-59736800 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr8:59720600-59738200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr8:59720600-59754800 Weak transcription Small Intestine intestine
7 chr8:59720800-59739000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr8:59720800-59745200 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr8:59720800-59762600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr8:59721000-59739000 Weak transcription NHLF lung
11 chr8:59721000-59739200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr8:59721000-59745000 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr8:59721400-59745000 Weak transcription Fetal Brain Male brain
14 chr8:59721600-59736400 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr8:59721600-59736800 Weak transcription Brain Germinal Matrix brain
16 chr8:59721600-59745400 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr8:59722000-59737800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr8:59722400-59757200 Strong transcription Dnd41 blood
19 chr8:59724600-59738800 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr8:59727000-59745400 Weak transcription H9 Cell Line embryonic stem cell
21 chr8:59728200-59736400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr8:59728400-59741600 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr8:59728400-59741600 Weak transcription H1 Cell Line embryonic stem cell
24 chr8:59729600-59736400 Weak transcription Stomach Smooth Muscle stomach
25 chr8:59729600-59739000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr8:59729600-59740000 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr8:59729600-59754800 Weak transcription Gastric stomach
28 chr8:59729800-59739000 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr8:59730200-59736600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr8:59730200-59739800 Weak transcription Fetal Lung lung
31 chr8:59730800-59770800 Strong transcription Fetal Thymus thymus
32 chr8:59731200-59738000 Weak transcription NHDF-Ad bronchial
33 chr8:59732000-59745000 Weak transcription Fetal Kidney kidney
34 chr8:59732200-59755200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr8:59733600-59739200 Weak transcription Muscle Satellite Cultured Cells --
36 chr8:59734000-59740000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr8:59734000-59745200 Weak transcription Fetal Brain Female brain
38 chr8:59734200-59739200 Weak transcription HUVEC blood vessel
39 chr8:59734200-59739600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr8:59734800-59740200 Strong transcription Primary T cells from cord blood blood
41 chr8:59735000-59739600 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr8:59735000-59740200 Strong transcription Thymus Thymus
43 chr8:59735200-59739200 Weak transcription Osteobl bone
44 chr8:59735200-59739800 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr8:59735400-59737600 Strong transcription Cortex derived primary cultured neurospheres brain
46 chr8:59735600-59738400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr8:59735600-59738800 Weak transcription Colon Smooth Muscle Colon
48 chr8:59735600-59739000 Strong transcription Primary hematopoietic stem cells blood
49 chr8:59735600-59740400 Weak transcription Rectal Smooth Muscle rectum
50 chr8:59735800-59737800 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015