Variant report

Variant rs565905873
Chromosome Location chr9:140389188-140389189
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140373800-140396000 Weak transcription Esophagus oesophagus
2 chr9:140375000-140392200 Weak transcription Brain Angular Gyrus brain
3 chr9:140376800-140444000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr9:140377000-140393400 Weak transcription Brain Substantia Nigra brain
5 chr9:140377000-140394400 Weak transcription Brain Cingulate Gyrus brain
6 chr9:140377000-140437000 Weak transcription Left Ventricle heart
7 chr9:140377200-140393800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr9:140377200-140420200 Weak transcription Rectal Smooth Muscle rectum
9 chr9:140377400-140393200 Weak transcription Stomach Smooth Muscle stomach
10 chr9:140381600-140396600 Strong transcription Liver Liver
11 chr9:140382400-140389400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr9:140382600-140397400 Weak transcription Lung lung
13 chr9:140384400-140391200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr9:140384600-140397600 Strong transcription Ovary ovary
15 chr9:140386000-140393000 Weak transcription Primary B cells from cord blood blood
16 chr9:140386400-140392400 Weak transcription Primary B cells from peripheral blood blood
17 chr9:140386600-140391400 Weak transcription Brain Anterior Caudate brain
18 chr9:140386600-140403200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr9:140386600-140403400 Weak transcription Aorta Aorta
20 chr9:140386800-140393600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr9:140387600-140389200 Enhancers Primary monocytes fromperipheralblood blood
22 chr9:140387600-140389400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr9:140387600-140389800 ZNF genes & repeats Fetal Stomach stomach
24 chr9:140387600-140389800 Enhancers Spleen Spleen
25 chr9:140387800-140389600 Enhancers Rectal Mucosa Donor 29 rectum
26 chr9:140388000-140389200 Strong transcription Pancreas Pancrea
27 chr9:140388000-140389400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
28 chr9:140388200-140389200 Enhancers Primary hematopoietic stem cells short term culture blood
29 chr9:140388200-140389200 Genic enhancers Adipose Nuclei Adipose
30 chr9:140388200-140389400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr9:140388200-140389600 Enhancers Duodenum Mucosa Duodenum
32 chr9:140388400-140389600 Weak transcription Fetal Lung lung
33 chr9:140388400-140393200 Weak transcription Brain Inferior Temporal Lobe brain
34 chr9:140388400-140397600 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr9:140388400-140404000 Weak transcription Brain Hippocampus Middle brain
36 chr9:140388400-140425200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr9:140388600-140389800 Genic enhancers Skeletal Muscle Female skeletal muscle
38 chr9:140388600-140390000 Genic enhancers Skeletal Muscle Male skeletal muscle
39 chr9:140388600-140394400 Weak transcription Fetal Intestine Small intestine
40 chr9:140388600-140395800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr9:140388800-140389200 Enhancers HUVEC blood vessel
42 chr9:140388800-140389200 Enhancers K562 blood
43 chr9:140388800-140389400 Enhancers Rectal Mucosa Donor 31 rectum
44 chr9:140388800-140396600 Weak transcription Fetal Muscle Leg muscle
45 chr9:140389000-140389200 Enhancers Monocytes-CD14+_RO01746 blood
46 chr9:140389000-140389400 Genic enhancers Gastric stomach
47 chr9:140389000-140389600 Genic enhancers Right Ventricle heart
48 chr9:140389000-140390600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr9:140389000-140392800 Weak transcription Colonic Mucosa Colon
50 chr9:140389000-140403800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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