Variant report

Variant	rs565944115
Chromosome Location	chr1:55929182-55929183
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv10184	chr1:55728755-56084833	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1008241	chr1:55922008-55972596	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
3	esv3452279	chr1:55927317-55929474	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv3452278	chr1:55927621-55929299	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv3324988	chr1:55927702-55929230	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv3452280	chr1:55927716-55929232	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:55929000-55930000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr1:55929000-55930600	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr1:55929000-55930800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr1:55929000-55930800	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr1:55929000-55931200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr1:55929000-55931200	Enhancers	Thymus	Thymus
7	chr1:55929000-55931800	Enhancers	Fetal Thymus	thymus
8	chr1:55929000-55935200	Enhancers	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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