The 2.0 version of rSNPBase

Variant report

Variant rs565947321
Chromosome Location chr1:214705957-214705958
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214688400-214706200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:214688400-214710600 Weak transcription Spleen Spleen
3 chr1:214692400-214710600 Weak transcription HUVEC blood vessel
4 chr1:214694400-214706400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:214697800-214706000 Weak transcription Lung lung
6 chr1:214698800-214710800 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:214699200-214706200 Weak transcription H1 Cell Line embryonic stem cell
8 chr1:214699200-214706200 Weak transcription Esophagus oesophagus
9 chr1:214699200-214711400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:214699200-214711600 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr1:214699200-214722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:214699200-214722400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:214699400-214706000 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:214699800-214715200 Weak transcription Stomach Mucosa stomach
15 chr1:214700000-214706000 Weak transcription Stomach Smooth Muscle stomach
16 chr1:214700800-214706400 Weak transcription Left Ventricle heart
17 chr1:214700800-214711400 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr1:214701200-214710400 Weak transcription Adipose Nuclei Adipose
19 chr1:214701200-214710800 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr1:214701200-214710800 Weak transcription NH-A brain
21 chr1:214701200-214719000 Weak transcription Hela-S3 cervix
22 chr1:214701400-214710600 Weak transcription NHDF-Ad bronchial
23 chr1:214701600-214710400 Weak transcription A549 lung
24 chr1:214702200-214706800 Weak transcription Fetal Intestine Large intestine
25 chr1:214702800-214718800 Weak transcription Aorta Aorta
26 chr1:214703000-214710600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr1:214703000-214711600 Weak transcription Psoas Muscle Psoas
28 chr1:214703600-214706600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:214703600-214710400 Weak transcription Small Intestine intestine
30 chr1:214703800-214706000 Enhancers Fetal Brain Male brain
31 chr1:214703800-214711800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:214704000-214706000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:214704000-214707000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:214704200-214711600 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr1:214704600-214706800 Strong transcription HSMM muscle
36 chr1:214704800-214706600 Strong transcription Muscle Satellite Cultured Cells --
37 chr1:214704800-214706800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:214704800-214706800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:214704800-214707000 Strong transcription HMEC breast
40 chr1:214704800-214707000 Strong transcription NHEK skin
41 chr1:214705000-214706800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:214705000-214710600 Weak transcription Fetal Lung lung
43 chr1:214705200-214706400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr1:214705200-214706400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:214705200-214707000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:214705200-214710600 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr1:214705400-214706600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:214705400-214706600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:214705400-214706600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr1:214705400-214706600 Strong transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015