The 2.0 version of rSNPBase

Variant report

Variant rs566002296
Chromosome Location chr17:66524875-66524876
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:66509600-66525800 Weak transcription Pancreas Pancrea
2 chr17:66511600-66537000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr17:66511600-66537000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr17:66511800-66531600 Strong transcription Fetal Intestine Large intestine
5 chr17:66511800-66536600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr17:66511800-66537000 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr17:66511800-66537800 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr17:66512000-66530000 Strong transcription HSMM muscle
9 chr17:66513200-66528600 Strong transcription Muscle Satellite Cultured Cells --
10 chr17:66513200-66533000 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr17:66514200-66528800 Strong transcription HepG2 liver
12 chr17:66514600-66526400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr17:66514800-66525600 Weak transcription Spleen Spleen
14 chr17:66514800-66527800 Strong transcription Fetal Muscle Trunk muscle
15 chr17:66514800-66537000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr17:66514800-66537400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr17:66514800-66537600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr17:66515000-66535800 Strong transcription Placenta Placenta
19 chr17:66515200-66533400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr17:66515200-66534600 Strong transcription Primary monocytes fromperipheralblood blood
21 chr17:66516400-66525600 Weak transcription Gastric stomach
22 chr17:66516600-66527400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr17:66516600-66535800 Strong transcription Primary T helper cells fromperipheralblood blood
24 chr17:66516800-66535400 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr17:66517200-66530000 Strong transcription Osteobl bone
26 chr17:66517200-66537600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr17:66517400-66537000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr17:66517600-66526400 Weak transcription Fetal Intestine Small intestine
29 chr17:66517600-66528800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr17:66517600-66529800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr17:66517600-66532200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr17:66517600-66535400 Strong transcription HMEC breast
33 chr17:66517600-66536800 Strong transcription Fetal Thymus thymus
34 chr17:66517600-66537200 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr17:66517800-66528600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr17:66518000-66528200 Strong transcription NHDF-Ad bronchial
37 chr17:66518000-66534000 Strong transcription Primary T helper cells PMA-I stimulated --
38 chr17:66518000-66534600 Strong transcription A549 lung
39 chr17:66518000-66535800 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr17:66518000-66536800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr17:66518000-66537200 Strong transcription iPS-18 Cell Line embryonic stem cell
42 chr17:66518200-66527800 Strong transcription Fetal Muscle Leg muscle
43 chr17:66518200-66530000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr17:66518200-66534600 Strong transcription Primary B cells from cord blood blood
45 chr17:66518200-66536600 Strong transcription Primary T cells fromperipheralblood blood
46 chr17:66518200-66536800 Strong transcription Rectal Mucosa Donor 31 rectum
47 chr17:66518200-66537600 Strong transcription Primary T cells from cord blood blood
48 chr17:66518200-66537800 Strong transcription Duodenum Mucosa Duodenum
49 chr17:66518400-66527600 Strong transcription NHLF lung
50 chr17:66518400-66527800 Strong transcription HSMMtube muscle

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Last update: Aug 31, 2015