Variant report

Variant	rs566178013
Chromosome Location	chr8:96209446-96209447
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:96205630..96207268-chr8:96208398..96210868,2	K562	blood:
2	chr8:96139078..96141526-chr8:96207452..96210065,2	MCF-7	breast:
3	chr8:96201649..96205216-chr8:96206550..96209721,4	MCF-7	breast:
4	chr8:96123068..96125522-chr8:96208069..96210345,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017301	chr8:95273503-96248352	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv539680	chr8:95273503-96248352	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
3	nsv523655	chr8:96205920-96239113	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	esv16466	chr8:96206151-96243934	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv516035	chr8:96208726-96235451	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:96204600-96212400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
2	chr8:96205000-96213400	Weak transcription	Lung	lung
3	chr8:96205600-96210200	Weak transcription	HMEC	breast
4	chr8:96205600-96213800	Weak transcription	Thymus	Thymus
5	chr8:96206200-96210000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:96206400-96215000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr8:96207400-96212800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr8:96208200-96211000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr8:96208200-96211200	Enhancers	NHEK	skin
10	chr8:96208400-96212000	Weak transcription	Primary B cells from peripheral blood	blood
11	chr8:96208600-96211800	Weak transcription	Right Atrium	heart
12	chr8:96208600-96216400	Weak transcription	Gastric	stomach
13	chr8:96208800-96210200	Weak transcription	Hela-S3	cervix
14	chr8:96209000-96210000	Weak transcription	Placenta	Placenta
15	chr8:96209000-96210200	Weak transcription	Stomach Mucosa	stomach
16	chr8:96209000-96211800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr8:96209000-96220000	Weak transcription	Right Ventricle	heart
18	chr8:96209200-96209600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr8:96209200-96209600	Weak transcription	Esophagus	oesophagus
20	chr8:96209200-96209600	Weak transcription	Pancreas	Pancrea

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