Variant report

Variant	rs566203028
Chromosome Location	chr2:187674985-187674986
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428069	chr2:187575692-187766209	ZNF genes & repeats Weak transcription Active TSS Strong transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases
2	esv3495864	chr2:187633495-187686087	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv3495865	chr2:187633495-187686087	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv3446718	chr2:187663495-187686087	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
5	esv3345821	chr2:187663495-187692736	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
6	esv3509137	chr2:187673557-187677655	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
7	esv3509138	chr2:187673957-187677555	Enhancers Active TSS Weak transcription	n/a	n/a	inside rSNPs	n/a
8	esv3459914	chr2:187674495-187676681	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
9	esv3509135	chr2:187674529-187676734	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv3509134	chr2:187674542-187676605	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
11	esv3459912	chr2:187674555-187676611	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
12	esv3509136	chr2:187674588-187676672	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
13	esv3459913	chr2:187674633-187676520	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv3509139	chr2:187674643-187676524	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv3459915	chr2:187674647-187676522	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv3509140	chr2:187674647-187676522	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:187674400-187675000	Enhancers	HUES6 Cell Line	embryonic stem cell
2	chr2:187674400-187675000	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr2:187674400-187675200	Enhancers	HUVEC	blood vessel
4	chr2:187674400-187685400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr2:187674600-187675200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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