Variant report

Variant	rs566460590
Chromosome Location	chr11:16908258-16908259
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832077	chr11:16834545-17059176	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv825770	chr11:16908083-16912537	Weak transcription ZNF genes & repeats Enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:16898400-16908400	Weak transcription	HepG2	liver
2	chr11:16903200-16908800	Weak transcription	Fetal Intestine Small	intestine
3	chr11:16903600-16908800	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr11:16903600-16914400	Weak transcription	Right Atrium	heart
5	chr11:16905200-16909000	Weak transcription	Esophagus	oesophagus
6	chr11:16905200-16909200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr11:16905200-16909200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr11:16905200-16913600	Weak transcription	Gastric	stomach
9	chr11:16905200-16913600	Weak transcription	Pancreas	Pancrea
10	chr11:16908000-16911600	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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