Variant report

Variant	rs566475664
Chromosome Location	chr3:134010674-134010675
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3522171	chr3:133889405-134156571	Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	esv3522172	chr3:133889405-134156571	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
3	esv3439062	chr3:134010287-134013035	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
4	esv3327243	chr3:134010437-134012760	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134008200-134011000	Enhancers	Fetal Lung	lung
2	chr3:134009600-134011000	Enhancers	Fetal Stomach	stomach
3	chr3:134009800-134010800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr3:134009800-134010800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr3:134009800-134010800	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr3:134009800-134010800	Enhancers	Hela-S3	cervix
7	chr3:134009800-134011000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr3:134009800-134011000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr3:134009800-134011000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr3:134009800-134011000	Enhancers	Fetal Heart	heart
11	chr3:134009800-134011000	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr3:134009800-134011200	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr3:134010000-134011000	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr3:134010000-134011000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr3:134010000-134011000	Enhancers	Adipose Nuclei	Adipose
16	chr3:134010000-134011000	Enhancers	Fetal Muscle Leg	muscle
17	chr3:134010000-134011000	Enhancers	Right Ventricle	heart
18	chr3:134010200-134010800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr3:134010200-134010800	Flanking Active TSS	Stomach Smooth Muscle	stomach
20	chr3:134010200-134011000	Enhancers	Muscle Satellite Cultured Cells	--
21	chr3:134010200-134011000	Enhancers	Cortex derived primary cultured neurospheres	brain
22	chr3:134010200-134011000	Enhancers	Small Intestine	intestine
23	chr3:134010200-134011000	Enhancers	HSMMtube	muscle
24	chr3:134010200-134011200	Enhancers	NHLF	lung
25	chr3:134010400-134010800	Enhancers	HMEC	breast
26	chr3:134010400-134011000	Enhancers	Primary monocytes fromperipheralblood	blood
27	chr3:134010400-134011000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr3:134010400-134011000	Enhancers	Colonic Mucosa	Colon
29	chr3:134010400-134011000	Enhancers	NHEK	skin
30	chr3:134010400-134011000	Enhancers	Osteobl	bone
31	chr3:134010600-134010800	Enhancers	Primary T helper cells fromperipheralblood	blood
32	chr3:134010600-134011000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr3:134010600-134011000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr3:134010600-134012000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr3:134010600-134012000	Weak transcription	Colon Smooth Muscle	Colon
36	chr3:134010600-134012000	Weak transcription	Ovary	ovary
37	chr3:134010600-134013000	Weak transcription	Dnd41	blood
38	chr3:134010600-134018200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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