Variant report

Variant	rs566702369
Chromosome Location	chr1:85229840-85229841
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv947190	chr1:85229432-85235799	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85204200-85230400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:85216800-85230000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:85225800-85230000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr1:85225800-85233600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr1:85226000-85230000	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr1:85226000-85230400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr1:85226800-85230000	Weak transcription	Fetal Brain Male	brain
8	chr1:85228400-85230000	Enhancers	Fetal Heart	heart
9	chr1:85228600-85230400	Enhancers	Brain Germinal Matrix	brain
10	chr1:85228800-85238200	Weak transcription	Stomach Mucosa	stomach
11	chr1:85229200-85230600	Enhancers	Fetal Brain Female	brain
12	chr1:85229400-85230600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr1:85229400-85230600	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr1:85229400-85230600	Enhancers	Cortex derived primary cultured neurospheres	brain
15	chr1:85229400-85230800	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr1:85229400-85230800	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr1:85229400-85230800	Enhancers	Brain Anterior Caudate	brain
18	chr1:85229600-85230000	Enhancers	Brain Hippocampus Middle	brain
19	chr1:85229600-85230000	Enhancers	Fetal Lung	lung
20	chr1:85229600-85230200	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr1:85229600-85230200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr1:85229600-85230200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr1:85229600-85230400	Enhancers	HMEC	breast
24	chr1:85229600-85230800	Enhancers	H1 Cell Line	embryonic stem cell
25	chr1:85229600-85230800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr1:85229800-85230000	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
27	chr1:85229800-85230000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
28	chr1:85229800-85230200	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
29	chr1:85229800-85230200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr1:85229800-85230200	Bivalent Enhancer	NHEK	skin
31	chr1:85229800-85230400	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
32	chr1:85229800-85230400	Enhancers	Placenta	Placenta

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