The 2.0 version of rSNPBase

Variant report

Variant rs566738540
Chromosome Location chr5:126123202-126123203
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:126114600-126141600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr5:126114600-126142000 Weak transcription Spleen Spleen
3 chr5:126114600-126161600 Weak transcription Ovary ovary
4 chr5:126115000-126140400 Weak transcription Fetal Intestine Large intestine
5 chr5:126115200-126123600 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr5:126115200-126123600 Weak transcription H1 Cell Line embryonic stem cell
7 chr5:126115800-126131800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr5:126115800-126137400 Weak transcription HSMM muscle
9 chr5:126115800-126145800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:126116000-126123800 Weak transcription Primary T cells fromperipheralblood blood
11 chr5:126116000-126141600 Weak transcription Fetal Stomach stomach
12 chr5:126116400-126123600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr5:126116400-126123800 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr5:126116400-126124800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr5:126116400-126125000 Weak transcription Muscle Satellite Cultured Cells --
16 chr5:126116400-126125200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr5:126116400-126128600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr5:126116400-126128600 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr5:126116400-126128800 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr5:126116400-126128800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr5:126116400-126130000 Weak transcription Fetal Lung lung
22 chr5:126116400-126137000 Weak transcription Primary T cells from cord blood blood
23 chr5:126116400-126140000 Weak transcription Primary hematopoietic stem cells blood
24 chr5:126116400-126140200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr5:126116400-126140200 Weak transcription Thymus Thymus
26 chr5:126116400-126141000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr5:126116400-126143400 Weak transcription Primary B cells from cord blood blood
28 chr5:126116600-126131400 Weak transcription Fetal Intestine Small intestine
29 chr5:126116600-126140000 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr5:126116600-126147800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr5:126116800-126123800 Weak transcription H9 Cell Line embryonic stem cell
32 chr5:126116800-126128000 Weak transcription HUVEC blood vessel
33 chr5:126116800-126128600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr5:126117000-126135000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr5:126117000-126140800 Weak transcription Fetal Brain Female brain
36 chr5:126117800-126128400 Weak transcription Primary monocytes fromperipheralblood blood
37 chr5:126117800-126128800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr5:126117800-126141200 Weak transcription Brain Germinal Matrix brain
39 chr5:126118000-126124800 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr5:126118000-126128800 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr5:126118000-126137200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr5:126118200-126123800 Weak transcription NHDF-Ad bronchial
43 chr5:126118200-126125000 Weak transcription Fetal Heart heart
44 chr5:126119400-126123800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr5:126119800-126123800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr5:126121000-126125000 Enhancers Primary T regulatory cells fromperipheralblood blood
47 chr5:126121000-126132400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr5:126121200-126125200 Genic enhancers Dnd41 blood
49 chr5:126121400-126125400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr5:126121400-126126600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015