Variant report

Variant	rs566746549
Chromosome Location	chr8:121848751-121848752
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016172	chr8:121679590-121929916	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv2762767	chr8:121843465-121849583	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv891423	chr8:121847643-121994660	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121838400-121869800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:121846800-121849400	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr8:121846800-121850200	Enhancers	Primary T cells from cord blood	blood
4	chr8:121846800-121850800	Enhancers	Primary hematopoietic stem cells	blood
5	chr8:121847200-121849400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr8:121847200-121850000	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr8:121847400-121848800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
8	chr8:121847600-121848800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
9	chr8:121847600-121851200	Enhancers	HepG2	liver
10	chr8:121848000-121849400	Enhancers	Primary T cells fromperipheralblood	blood
11	chr8:121848000-121849600	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr8:121848000-121849800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:121848200-121848800	Enhancers	Liver	Liver
14	chr8:121848200-121849400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
15	chr8:121848200-121849400	Enhancers	Monocytes-CD14+_RO01746	blood
16	chr8:121848400-121848800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr8:121848400-121849200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr8:121848400-121849600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr8:121848400-121852400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr8:121848600-121848800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr8:121848600-121849200	Enhancers	Primary T helper cells PMA-I stimulated	--
22	chr8:121848600-121849200	Enhancers	Fetal Thymus	thymus
23	chr8:121848600-121850800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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