Variant report

Variant	rs56677324
Chromosome Location	chr5:36406475-36406476
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10070477	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10070547	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10070602	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10213770	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10213853	0.85[AFR][1000 genomes]
rs28469511	0.85[AFR][1000 genomes]
rs28564846	0.85[AFR][1000 genomes]
rs57283558	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61485710	0.89[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36404800-36407000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr5:36405000-36407400	Weak transcription	NH-A	brain
3	chr5:36405200-36406800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr5:36405200-36407400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr5:36405200-36407400	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr5:36405200-36407400	Weak transcription	Osteobl	bone
7	chr5:36405800-36408400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr5:36406000-36407000	Weak transcription	NHDF-Ad	bronchial
9	chr5:36406000-36407200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr5:36406200-36407000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr5:36406400-36406800	Weak transcription	Primary monocytes fromperipheralblood	blood
12	chr5:36406400-36406800	Weak transcription	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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