Variant report

Variant rs566893153
Chromosome Location chr12:12238564-12238565
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12225000-12255000 Weak transcription Small Intestine intestine
2 chr12:12225200-12239400 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr12:12225400-12239000 Weak transcription H1 Cell Line embryonic stem cell
4 chr12:12225400-12239600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr12:12225400-12239600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr12:12225600-12239000 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr12:12225800-12240200 Weak transcription Fetal Stomach stomach
8 chr12:12226600-12245000 Weak transcription Fetal Brain Male brain
9 chr12:12230000-12238600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr12:12231000-12239200 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr12:12231400-12238600 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr12:12231400-12239200 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr12:12231600-12239200 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr12:12232800-12240000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr12:12232800-12257000 Weak transcription HSMMtube muscle
16 chr12:12234800-12259600 Weak transcription Aorta Aorta
17 chr12:12235200-12242000 Weak transcription NHLF lung
18 chr12:12235400-12239400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr12:12235400-12239800 Weak transcription Brain Cingulate Gyrus brain
20 chr12:12235400-12243600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr12:12235400-12244600 Weak transcription Colonic Mucosa Colon
22 chr12:12235400-12245000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr12:12235400-12245200 Weak transcription Pancreas Pancrea
24 chr12:12235400-12260200 Weak transcription Gastric stomach
25 chr12:12235400-12260800 Weak transcription Stomach Smooth Muscle stomach
26 chr12:12235400-12278800 Weak transcription Muscle Satellite Cultured Cells --
27 chr12:12235600-12240800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr12:12236400-12239200 Strong transcription Fetal Intestine Small intestine
29 chr12:12236400-12239400 Weak transcription HepG2 liver
30 chr12:12236400-12240000 Weak transcription Stomach Mucosa stomach
31 chr12:12237000-12238800 Strong transcription Fetal Intestine Large intestine
32 chr12:12237200-12239600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr12:12237400-12259800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr12:12237600-12238600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr12:12238000-12245000 Strong transcription Duodenum Mucosa Duodenum
36 chr12:12238200-12240000 Genic enhancers Rectal Mucosa Donor 31 rectum
37 chr12:12238400-12238600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr12:12238400-12240200 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr12:12238400-12241000 Enhancers H9 Cell Line embryonic stem cell
40 chr12:12238400-12241000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell

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