Variant report

Variant	rs566919270
Chromosome Location	chr8:124565270-124565271
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:124559432..124561596-chr8:124564087..124567565,3	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831450	chr8:124471741-124661359	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv525827	chr8:124555235-124565311	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
3	nsv520481	chr8:124565203-124565311	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:41 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124558800-124571400	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr8:124562400-124566000	Enhancers	Adipose Nuclei	Adipose
3	chr8:124562600-124565400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr8:124562600-124565400	Enhancers	HSMMtube	muscle
5	chr8:124562600-124565800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr8:124562600-124565800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr8:124562600-124565800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr8:124562600-124566000	Enhancers	HMEC	breast
9	chr8:124562600-124566000	Enhancers	NHDF-Ad	bronchial
10	chr8:124562800-124565400	Enhancers	NH-A	brain
11	chr8:124563200-124566000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr8:124563400-124565400	Enhancers	Esophagus	oesophagus
13	chr8:124563400-124565400	Enhancers	Ovary	ovary
14	chr8:124563400-124565800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr8:124563400-124566000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr8:124564200-124565600	Enhancers	Aorta	Aorta
17	chr8:124564400-124565400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr8:124564800-124565400	Enhancers	Fetal Stomach	stomach
19	chr8:124564800-124565400	Enhancers	NHLF	lung
20	chr8:124564800-124565800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr8:124564800-124565800	Enhancers	Primary monocytes fromperipheralblood	blood
22	chr8:124564800-124566000	Enhancers	Fetal Lung	lung
23	chr8:124564800-124566600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr8:124565000-124565400	Enhancers	Cortex derived primary cultured neurospheres	brain
25	chr8:124565000-124565400	Enhancers	Brain Substantia Nigra	brain
26	chr8:124565000-124565400	Enhancers	Placenta	Placenta
27	chr8:124565000-124565400	Enhancers	Skeletal Muscle Female	skeletal muscle
28	chr8:124565000-124565600	Enhancers	Primary neutrophils fromperipheralblood	blood
29	chr8:124565000-124565600	Enhancers	Brain Cingulate Gyrus	brain
30	chr8:124565000-124565600	Enhancers	HSMM	muscle
31	chr8:124565000-124565600	Flanking Active TSS	Osteobl	bone
32	chr8:124565000-124565800	Enhancers	Monocytes-CD14+_RO01746	blood
33	chr8:124565000-124566000	Enhancers	Muscle Satellite Cultured Cells	--
34	chr8:124565000-124566000	Enhancers	Liver	Liver
35	chr8:124565000-124566200	Enhancers	Fetal Muscle Leg	muscle
36	chr8:124565000-124566600	Enhancers	Fetal Brain Male	brain
37	chr8:124565200-124565400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr8:124565200-124565400	Enhancers	Fetal Thymus	thymus
39	chr8:124565200-124565600	Enhancers	Brain Inferior Temporal Lobe	brain
40	chr8:124565200-124565800	Enhancers	Brain Anterior Caudate	brain
41	chr8:124565200-124567000	Weak transcription	NHEK	skin

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