Variant report

Variant	rs566939963
Chromosome Location	chr2:183091323-183091324
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:35 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv583913	chr2:183043563-183243313	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv533782	chr2:183059730-183500040	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1008825	chr2:183067339-183228668	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv536066	chr2:183067339-183228668	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv1807941	chr2:183068844-183091601	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
6	esv1814932	chr2:183068844-183091601	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
7	esv1805740	chr2:183086478-183091601	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
8	esv1811059	chr2:183086478-183091601	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv1814860	chr2:183086478-183091601	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv1805452	chr2:183086478-183107270	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	esv1809585	chr2:183086478-183107270	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	esv1808453	chr2:183087394-183091601	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv3419904	chr2:183088407-183093505	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
14	esv1812260	chr2:183088584-183091601	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
15	esv2433646	chr2:183090074-183092734	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases
16	esv2343576	chr2:183090241-183091774	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
17	esv3458813	chr2:183090270-183091725	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
18	esv3458812	chr2:183090302-183091714	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
19	esv3458814	chr2:183090332-183091658	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
20	esv3458815	chr2:183090387-183091634	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
21	esv12907	chr2:183090422-183091656	Enhancers Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases
22	esv1804463	chr2:183090444-183091601	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
23	esv1805099	chr2:183090444-183091601	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
24	esv1806458	chr2:183090444-183091601	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
25	esv1808119	chr2:183090444-183091601	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
26	esv1809371	chr2:183090444-183091601	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
27	esv1810164	chr2:183090444-183091601	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
28	esv1810166	chr2:183090444-183091601	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
29	esv1811248	chr2:183090444-183091601	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
30	esv1811679	chr2:183090444-183091601	Strong transcription Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
31	esv1811761	chr2:183090444-183091601	Enhancers Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases
32	esv1814639	chr2:183090444-183091601	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
33	nsv583914	chr2:183090444-183091601	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
34	esv1813209	chr2:183090586-183091601	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
35	nsv583915	chr2:183090586-183091601	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:183084400-183095200	Weak transcription	Left Ventricle	heart
2	chr2:183085400-183096600	Weak transcription	Brain Cingulate Gyrus	brain
3	chr2:183088000-183105800	Weak transcription	Aorta	Aorta
4	chr2:183088000-183106000	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr2:183088400-183091400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr2:183088400-183092000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr2:183088800-183092600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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