Variant report

Variant rs56695142
Chromosome Location chr2:54845856-54845857
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54829800-54859800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr2:54838800-54846200 Enhancers Right Atrium heart
3 chr2:54838800-54848800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr2:54838800-54860200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr2:54838800-54893400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr2:54839000-54846800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr2:54839000-54848200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
8 chr2:54839000-54864200 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr2:54839200-54846800 Genic enhancers Liver Liver
10 chr2:54839200-54848600 Genic enhancers Left Ventricle heart
11 chr2:54839200-54861800 Strong transcription HUES48 Cell Line embryonic stem cell
12 chr2:54839200-54866000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr2:54839400-54853000 Strong transcription Fetal Intestine Large intestine
14 chr2:54839400-54895000 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr2:54839600-54852400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr2:54839600-54862600 Strong transcription Primary monocytes fromperipheralblood blood
17 chr2:54839800-54846800 Strong transcription Fetal Muscle Trunk muscle
18 chr2:54839800-54847200 Genic enhancers Fetal Lung lung
19 chr2:54840800-54861400 Strong transcription Cortex derived primary cultured neurospheres brain
20 chr2:54841000-54861400 Strong transcription iPS-20b Cell Line embryonic stem cell
21 chr2:54841000-54861400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr2:54841200-54846800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr2:54841200-54847200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr2:54841200-54861200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:54841200-54897800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr2:54841600-54852400 Strong transcription HSMMtube muscle
27 chr2:54841600-54856200 Strong transcription Hela-S3 cervix
28 chr2:54841600-54857000 Strong transcription HSMM muscle
29 chr2:54841800-54847000 Strong transcription HMEC breast
30 chr2:54841800-54857000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr2:54841800-54860000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr2:54841800-54860000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:54842000-54863600 Strong transcription Fetal Brain Female brain
34 chr2:54842400-54846200 Genic enhancers Right Ventricle heart
35 chr2:54842400-54856800 Strong transcription NH-A brain
36 chr2:54842400-54861400 Strong transcription HUES6 Cell Line embryonic stem cell
37 chr2:54842400-54862800 Strong transcription NHEK skin
38 chr2:54842600-54846800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:54842600-54861000 Strong transcription iPS-18 Cell Line embryonic stem cell
40 chr2:54842600-54892000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr2:54842800-54846600 Genic enhancers Rectal Smooth Muscle rectum
42 chr2:54842800-54862400 Strong transcription H1 Cell Line embryonic stem cell
43 chr2:54842800-54867800 Strong transcription H9 Cell Line embryonic stem cell
44 chr2:54843000-54861400 Strong transcription HUES64 Cell Line embryonic stem cell
45 chr2:54843400-54846000 Strong transcription Fetal Brain Male brain
46 chr2:54843400-54847200 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr2:54843800-54846200 Strong transcription Brain Germinal Matrix brain
48 chr2:54844200-54846000 Genic enhancers Ovary ovary
49 chr2:54844200-54847400 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr2:54844200-54847400 Genic enhancers Pancreas Pancrea

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