The 2.0 version of rSNPBase

Variant report

Variant rs567015118
Chromosome Location chr1:85246420-85246421
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85241000-85247600 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:85241000-85263600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:85244000-85246800 Enhancers Primary hematopoietic stem cells short term culture blood
4 chr1:85244200-85246600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:85244800-85246600 Enhancers Primary T cells fromperipheralblood blood
6 chr1:85244800-85246600 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr1:85244800-85246600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:85244800-85246600 Enhancers Monocytes-CD14+_RO01746 blood
9 chr1:85244800-85246800 Enhancers Primary hematopoietic stem cells blood
10 chr1:85244800-85246800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:85245000-85246600 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr1:85245000-85246600 Enhancers Primary monocytes fromperipheralblood blood
13 chr1:85245000-85247800 Enhancers Primary T cells from cord blood blood
14 chr1:85245200-85246600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:85245400-85246600 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr1:85245400-85246600 Enhancers HMEC breast
17 chr1:85245400-85247800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:85246000-85250600 Weak transcription Colon Smooth Muscle Colon
19 chr1:85246200-85246600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:85246200-85246600 Enhancers Esophagus oesophagus
21 chr1:85246200-85246600 Bivalent Enhancer Osteobl bone
22 chr1:85246200-85247400 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:85246200-85247600 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr1:85246200-85247600 Weak transcription Brain Anterior Caudate brain
25 chr1:85246200-85247600 Weak transcription Brain Hippocampus Middle brain
26 chr1:85246200-85247800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr1:85246200-85247800 Weak transcription Brain Angular Gyrus brain
28 chr1:85246200-85248000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr1:85246200-85248000 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr1:85246200-85248200 Weak transcription NHDF-Ad bronchial
31 chr1:85246200-85250200 Weak transcription Stomach Smooth Muscle stomach
32 chr1:85246400-85246800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:85246400-85247600 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr1:85246400-85247600 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr1:85246400-85247600 Weak transcription Fetal Thymus thymus
36 chr1:85246400-85247800 Weak transcription Brain Cingulate Gyrus brain
37 chr1:85246400-85248000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr1:85246400-85250800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:85246400-85250800 Weak transcription NHEK skin

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Last update: Aug 31, 2015