Variant report

Variant	rs567087772
Chromosome Location	chr10:26681015-26681016
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894975	chr10:26343356-27014467	Strong transcription Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
2	nsv1043832	chr10:26669040-26809400	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv2760104	chr10:26679548-26693124	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26680400-26681200	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
2	chr10:26680400-26681200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
3	chr10:26680400-26681200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
4	chr10:26680400-26681400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
5	chr10:26680400-26681400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
6	chr10:26680400-26681400	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
7	chr10:26680400-26681400	Active TSS	Thymus	Thymus
8	chr10:26680400-26681600	Active TSS	Primary T cells from cord blood	blood
9	chr10:26680400-26681800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
10	chr10:26680600-26681200	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
11	chr10:26680600-26681200	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr10:26680600-26681200	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
13	chr10:26680600-26681200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
14	chr10:26680600-26681400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
15	chr10:26680600-26681400	Flanking Active TSS	Primary hematopoietic stem cells	blood
16	chr10:26680600-26681400	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr10:26680600-26681600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr10:26680600-26681600	Enhancers	GM12878-XiMat	blood
19	chr10:26680800-26681200	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
20	chr10:26680800-26681200	Active TSS	Primary T helper naive cells fromperipheralblood	blood
21	chr10:26680800-26681200	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr10:26680800-26681200	Bivalent/Poised TSS	Brain Angular Gyrus	brain
23	chr10:26680800-26681200	Bivalent Enhancer	Fetal Brain Male	brain
24	chr10:26680800-26681400	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
25	chr10:26680800-26681400	Flanking Bivalent TSS/Enh	Primary T helper cells fromperipheralblood	blood
26	chr10:26680800-26681400	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
27	chr10:26680800-26681400	Flanking Bivalent TSS/Enh	Primary mononuclear cells fromperipheralblood	Blood
28	chr10:26680800-26681400	Bivalent/Poised TSS	Brain Hippocampus Middle	brain
29	chr10:26680800-26681400	Bivalent/Poised TSS	Colonic Mucosa	Colon
30	chr10:26680800-26681600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
31	chr10:26680800-26681600	Flanking Active TSS	Primary B cells from cord blood	blood
32	chr10:26680800-26681800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
33	chr10:26681000-26681200	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr10:26681000-26681200	Flanking Bivalent TSS/Enh	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr10:26681000-26681200	Enhancers	Primary B cells from peripheral blood	blood
36	chr10:26681000-26681200	Active TSS	Primary T helper naive cells from peripheral blood	blood
37	chr10:26681000-26681200	Flanking Bivalent TSS/Enh	Primary T helper cells PMA-I stimulated	--
38	chr10:26681000-26681200	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr10:26681000-26681200	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
40	chr10:26681000-26681200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
41	chr10:26681000-26681200	Flanking Active TSS	Spleen	Spleen
42	chr10:26681000-26681400	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr10:26681000-26681400	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
44	chr10:26681000-26681400	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
45	chr10:26681000-26681400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
46	chr10:26681000-26681400	Bivalent Enhancer	Adipose Nuclei	Adipose
47	chr10:26681000-26681400	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
48	chr10:26681000-26681400	Bivalent Enhancer	Placenta	Placenta
49	chr10:26681000-26681800	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood

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