Variant report

Variant	rs567137833
Chromosome Location	chr18:44769225-44769226
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv828226	chr18:44762014-44801196	Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv1793532	chr18:44767785-44775293	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44762000-44769400	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr18:44763400-44769400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr18:44763400-44772400	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr18:44768800-44770600	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr18:44769000-44770600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr18:44769200-44770400	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr18:44769200-44771200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr18:44769200-44772800	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links