Variant report

Variant	rs56714548
Chromosome Location	chr14:81711148-81711149
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11622105	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11625861	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2371570	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2371571	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55643303	0.83[ASN][1000 genomes]
rs55742437	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55822231	0.85[ASN][1000 genomes]
rs56835982	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61978870	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7141288	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7160342	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7160569	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72695758	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8008870	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8015423	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8019108	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9944085	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832841	chr14:81588322-81743921	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	86 gene(s)	inside rSNPs	diseases
2	nsv902118	chr14:81679650-81715989	Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	84 gene(s)	inside rSNPs	n/a
3	nsv974355	chr14:81705202-81712801	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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