The 2.0 version of rSNPBase

Variant report

Variant rs567193037
Chromosome Location chr1:94850557-94850558
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94846000-94850600 Enhancers Fetal Thymus thymus
2 chr1:94846200-94854400 Enhancers Fetal Intestine Small intestine
3 chr1:94846600-94851200 Enhancers Primary hematopoietic stem cells blood
4 chr1:94846600-94851400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:94847400-94850600 Enhancers Stomach Mucosa stomach
6 chr1:94847400-94851800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr1:94849200-94851000 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr1:94849200-94851200 Enhancers Fetal Kidney kidney
9 chr1:94849400-94851200 Enhancers Primary T helper naive cells from peripheral blood blood
10 chr1:94849400-94851600 Active TSS Rectal Mucosa Donor 29 rectum
11 chr1:94849600-94850600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:94849600-94850800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
13 chr1:94849600-94851200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:94849600-94851200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr1:94849600-94851400 Enhancers Primary T helper cells fromperipheralblood blood
16 chr1:94849600-94851800 Enhancers Primary hematopoietic stem cells short term culture blood
17 chr1:94849600-94852200 Enhancers Pancreatic Islets Pancreatic Islet
18 chr1:94849800-94851000 Weak transcription Esophagus oesophagus
19 chr1:94849800-94851200 Enhancers Right Atrium heart
20 chr1:94850000-94850600 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr1:94850000-94851200 Flanking Active TSS Duodenum Mucosa Duodenum
22 chr1:94850000-94851200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
23 chr1:94850000-94851400 Flanking Active TSS HepG2 liver
24 chr1:94850000-94854000 Enhancers Fetal Intestine Large intestine
25 chr1:94850200-94850600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
26 chr1:94850200-94850800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:94850200-94850800 Enhancers Primary B cells from peripheral blood blood
28 chr1:94850200-94850800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
29 chr1:94850200-94850800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
30 chr1:94850200-94850800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:94850200-94850800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:94850200-94850800 Flanking Active TSS Liver Liver
33 chr1:94850200-94850800 Enhancers Lung lung
34 chr1:94850200-94850800 Enhancers HSMM muscle
35 chr1:94850200-94851000 Enhancers Primary neutrophils fromperipheralblood blood
36 chr1:94850200-94851200 Enhancers Primary monocytes fromperipheralblood blood
37 chr1:94850200-94851200 Flanking Active TSS Primary T cells from cord blood blood
38 chr1:94850200-94851200 Enhancers Pancreas Pancrea
39 chr1:94850200-94851200 Flanking Active TSS Thymus Thymus
40 chr1:94850200-94851200 Enhancers Spleen Spleen
41 chr1:94850200-94851200 Flanking Active TSS Dnd41 blood
42 chr1:94850200-94851400 Active TSS Rectal Smooth Muscle rectum
43 chr1:94850200-94851400 Flanking Active TSS A549 lung
44 chr1:94850400-94850800 Flanking Active TSS Primary T cells fromperipheralblood blood
45 chr1:94850400-94850800 Enhancers Primary T regulatory cells fromperipheralblood blood
46 chr1:94850400-94850800 Enhancers Primary Natural Killer cells fromperipheralblood blood
47 chr1:94850400-94850800 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr1:94850400-94850800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
49 chr1:94850400-94851000 Enhancers Primary B cells from cord blood blood
50 chr1:94850400-94851200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015