Variant report

Variant	rs567241727
Chromosome Location	chr2:185550454-185550455
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532412	chr2:185347334-186108701	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv834484	chr2:185550006-185762728	Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:185544200-185550600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:185545200-185557000	Weak transcription	Fetal Stomach	stomach
3	chr2:185545800-185552200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr2:185546000-185550600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr2:185548600-185552200	Enhancers	NHEK	skin
6	chr2:185549000-185551000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr2:185549200-185550600	Weak transcription	HMEC	breast
8	chr2:185550000-185550800	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr2:185550200-185552000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr2:185550400-185551200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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