Variant report

Variant	rs567415753
Chromosome Location	chr1:95100527-95100528
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:95100479..95101193-chr1:95267507..95268149,2	MCF-7	breast:
2	chr1:95098692..95101011-chr1:95110470..95114437,3	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001587	chr1:95027691-95318680	Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
2	nsv519997	chr1:95083836-95113417	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1001230	chr1:95085184-95108531	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv1910	chr1:95100383-95111872	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95090000-95102800	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr1:95090800-95100600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr1:95095400-95100600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr1:95095400-95100600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr1:95095400-95100600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr1:95095800-95101400	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr1:95095800-95102200	Weak transcription	Fetal Intestine Small	intestine
8	chr1:95095800-95108400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr1:95096600-95100600	Weak transcription	Placenta	Placenta
10	chr1:95098200-95100600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr1:95098600-95101000	Enhancers	Primary neutrophils fromperipheralblood	blood
12	chr1:95099000-95101400	Enhancers	Pancreas	Pancrea
13	chr1:95099000-95102000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr1:95099400-95102000	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr1:95099400-95102800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr1:95099400-95102800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr1:95099600-95100600	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr1:95099600-95100600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr1:95099600-95102200	Weak transcription	Ovary	ovary
20	chr1:95099600-95102800	Weak transcription	NHDF-Ad	bronchial
21	chr1:95099800-95111600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr1:95100000-95101800	Enhancers	K562	blood
23	chr1:95100000-95103200	Enhancers	NHEK	skin
24	chr1:95100200-95100600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr1:95100200-95100800	Enhancers	NHLF	lung
26	chr1:95100200-95103000	Enhancers	HMEC	breast
27	chr1:95100400-95100800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr1:95100400-95101000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr1:95100400-95101600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr1:95100400-95101800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
31	chr1:95100400-95102000	Enhancers	HUES64 Cell Line	embryonic stem cell
32	chr1:95100400-95102800	Enhancers	HUES6 Cell Line	embryonic stem cell
33	chr1:95100400-95102800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr1:95100400-95103000	Enhancers	ES-I3 Cell Line	embryonic stem cell
35	chr1:95100400-95103200	Enhancers	iPS-15b Cell Line	embryonic stem cell
36	chr1:95100400-95103200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr1:95100400-95103400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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